Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.05-49-ga017d599f4d1) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Calling BCSetup() Calling BaseStateGeometry::Init() Calling init_base_state_geometry() Calling Init() Calling InitData() initdata model_File = cutoff densities: low density cutoff (for mapping the model) = 1e-10 buoyancy cutoff density (for zeroing rho - rho_0, centrifugal term) = 5e-10 anelastic cutoff = 1e-10 Maximum HSE Error = 4.547473509e-13 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile RT_pltInitData after InitData Time to write plotfile: 0.066585844 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.005112432 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile RT_pltafter_InitProj after InitProj Time to write plotfile: 0.064774929 Call to firstdt for level 0 gives dt_lev = 0.000608983586 Multiplying dt_lev by init_shrink; dt_lev = 6.08983586e-05 Minimum firstdt over all levels = 6.08983586e-05 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.00502301 Iter = 0 Bottom = 0 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.08660444773 Minimum estdt over all levels = 0.08660444773 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773 Multiplying dt by init_shrink; dt = 0.008660444773 Ignoring this new dt since it's larger than the previous dt = 6.08983586e-05 Writing plotfile RT_pltafter_DivuIter after final DivuIter Time to write plotfile: 0.062563667 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 0.002421164472 MLMG: Initial residual (resid0) = 0.002421164472 MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907782e-13, 7.235806582e-11 MLMG: Timers: Solve = 0.076942939 Iter = 0.074730026 Bottom = 0.019999504 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 0.002421205691 MLMG: Initial residual (resid0) = 2.151449932e-06 MLMG: Final Iter. 7 resid, resid/bnorm = 9.927908768e-14, 4.100398741e-11 MLMG: Timers: Solve = 0.05890203 Iter = 0.056931755 Bottom = 0.01446042 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 58.12657035 MLMG: Initial residual (resid0) = 58.12657035 MLMG: Final Iter. 8 resid, resid/bnorm = 6.465938895e-12, 1.112389542e-13 MLMG: Timers: Solve = 0.27677831 Iter = 0.271631139 Bottom = 0.002180376 Done calling nodal solver Timestep 0 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.10319462 seconds MAC Proj :0.146010565 seconds Nodal Proj :0.29635773 seconds Reactions :0.007892153 seconds Misc :0.010480275 seconds Base State :0.011372868 seconds Time to advance time step: 0.564076371 Writing plotfile 0 after all initialization Time to write plotfile: 0.063947498 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2.394238647e-05 MLMG: Initial residual (resid0) = 2.394238647e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 3.181107938e-16, 1.328651153e-11 MLMG: Timers: Solve = 0.078295198 Iter = 0.075337547 Bottom = 0.02055826 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2.394218844e-05 MLMG: Initial residual (resid0) = 1.928423641e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 6.036513706e-16, 2.521287359e-11 MLMG: Timers: Solve = 0.074610304 Iter = 0.072606374 Bottom = 0.017723721 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003539812449 MLMG: Initial residual (resid0) = 0.003539812449 MLMG: Final Iter. 8 resid, resid/bnorm = 4.065758147e-16, 1.148580103e-13 MLMG: Timers: Solve = 0.275854748 Iter = 0.269808938 Bottom = 0.002224706 Done calling nodal solver Timestep 1 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.141880089 seconds MAC Proj :0.162531255 seconds Nodal Proj :0.295637452 seconds Reactions :0.007317247 seconds Misc :0.019382141 seconds Base State :0.01114683 seconds Time to advance time step: 0.626877758 Call to estdt for level 0 gives dt_lev = 0.3128878797 Minimum estdt over all levels = 0.3128878797 Call to estdt at beginning of step 2 gives dt =0.3128878797 dt_growth factor limits the new dt = 6.698819446e-05 Timestep 2 starts with TIME = 6.08983586e-05 DT = 6.698819446e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.050043586e-05 MLMG: Initial residual (resid0) = 3.050043586e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 2.617770239e-15, 8.582730593e-11 MLMG: Timers: Solve = 0.084160779 Iter = 0.081395911 Bottom = 0.020123439 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.058937698e-05 MLMG: Initial residual (resid0) = 1.852182625e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 2.673943009e-15, 8.741410492e-11 MLMG: Timers: Solve = 0.0822744 Iter = 0.080292461 Bottom = 0.019885692 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003894011863 MLMG: Initial residual (resid0) = 0.003894011863 MLMG: Final Iter. 8 resid, resid/bnorm = 4.379092575e-16, 1.124570938e-13 MLMG: Timers: Solve = 0.276118357 Iter = 0.271290611 Bottom = 0.002255263 Done calling nodal solver Timestep 2 ends with TIME = 0.0001278865531 DT = 6.698819446e-05 Timing summary: Advection :0.156017178 seconds MAC Proj :0.17557256 seconds Nodal Proj :0.297462603 seconds Reactions :0.008294841 seconds Misc :0.011890476 seconds Base State :0.011507859 seconds Time to advance time step: 0.649393222 Call to estdt for level 0 gives dt_lev = 0.313034373 Minimum estdt over all levels = 0.313034373 Call to estdt at beginning of step 3 gives dt =0.313034373 dt_growth factor limits the new dt = 7.368701391e-05 Timestep 3 starts with TIME = 0.0001278865531 DT = 7.368701391e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.955145654e-05 MLMG: Initial residual (resid0) = 3.955145654e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 3.927744822e-15, 9.930721055e-11 MLMG: Timers: Solve = 0.08367627 Iter = 0.08073376 Bottom = 0.020036203 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.959539496e-05 MLMG: Initial residual (resid0) = 1.255171006e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 1.938210952e-15, 4.895041339e-11 MLMG: Timers: Solve = 0.074715297 Iter = 0.072748868 Bottom = 0.018293739 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004283412997 MLMG: Initial residual (resid0) = 0.004283412997 MLMG: Final Iter. 8 resid, resid/bnorm = 5.022024463e-16, 1.172435267e-13 MLMG: Timers: Solve = 0.272824522 Iter = 0.267476124 Bottom = 0.002126379 Done calling nodal solver Timestep 3 ends with TIME = 0.000201573567 DT = 7.368701391e-05 Timing summary: Advection :0.097304863 seconds MAC Proj :0.167652131 seconds Nodal Proj :0.298972689 seconds Reactions :0.007415343 seconds Misc :0.011247444 seconds Base State :0.010421408 seconds Time to advance time step: 0.582716464 Call to estdt for level 0 gives dt_lev = 0.3130323766 Minimum estdt over all levels = 0.3130323766 Call to estdt at beginning of step 4 gives dt =0.3130323766 dt_growth factor limits the new dt = 8.10557153e-05 Timestep 4 starts with TIME = 0.000201573567 DT = 8.10557153e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 5.584764577e-05 MLMG: Initial residual (resid0) = 5.584764577e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 4.629171376e-15, 8.28892841e-11 MLMG: Timers: Solve = 0.0836281 Iter = 0.080776587 Bottom = 0.020015785 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 5.589656377e-05 MLMG: Initial residual (resid0) = 8.595300424e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 1.488443564e-15, 2.662853428e-11 MLMG: Timers: Solve = 0.075762581 Iter = 0.07375398 Bottom = 0.019324705 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004711754539 MLMG: Initial residual (resid0) = 0.004711754539 MLMG: Final Iter. 8 resid, resid/bnorm = 5.533767888e-16, 1.174460138e-13 MLMG: Timers: Solve = 0.273756316 Iter = 0.267760365 Bottom = 0.002219578 Done calling nodal solver Timestep 4 ends with TIME = 0.0002826292823 DT = 8.10557153e-05 Timing summary: Advection :0.126652226 seconds MAC Proj :0.16857574 seconds Nodal Proj :0.292769158 seconds Reactions :0.008494112 seconds Misc :0.012954073 seconds Base State :0.00960246 seconds Time to advance time step: 0.609590379 Call to estdt for level 0 gives dt_lev = 0.3130323438 Minimum estdt over all levels = 0.3130323438 Call to estdt at beginning of step 5 gives dt =0.3130323438 dt_growth factor limits the new dt = 8.916128683e-05 Timestep 5 starts with TIME = 0.0002826292823 DT = 8.916128683e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 7.377430079e-05 MLMG: Initial residual (resid0) = 7.377430079e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 5.751137401e-15, 7.795583745e-11 MLMG: Timers: Solve = 0.083668463 Iter = 0.080596305 Bottom = 0.019925049 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 7.382811969e-05 MLMG: Initial residual (resid0) = 1.231781927e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 2.413391684e-15, 3.268932887e-11 MLMG: Timers: Solve = 0.075594812 Iter = 0.073609181 Bottom = 0.019104793 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.005182930428 MLMG: Initial residual (resid0) = 0.005182930428 MLMG: Final Iter. 8 resid, resid/bnorm = 5.898059818e-16, 1.13797781e-13 MLMG: Timers: Solve = 0.27213786 Iter = 0.267294988 Bottom = 0.002149854 Done calling nodal solver Timestep 5 ends with TIME = 0.0003717905691 DT = 8.916128683e-05 Timing summary: Advection :0.123910088 seconds MAC Proj :0.169684703 seconds Nodal Proj :0.292232683 seconds Reactions :0.007061223 seconds Misc :0.011077904 seconds Base State :0.008835845 seconds Time to advance time step: 0.604094493 Writing plotfile 5 Time to write plotfile: 0.064751256 Total Time: 4.21896006 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [RT_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10393 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.05-49-ga017d599f4d1) finalized