Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.05-56-g72ef88ee6a1d) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling BaseStateGeometry::Init() Calling init_base_state_geometry() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.566172706 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.069526531 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.498937121 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812665 MLMG: Initial residual (resid0) = 2054.812665 MLMG: Final Iter. 7 resid, resid/bnorm = 3.681712712e-10, 1.791751032e-13 MLMG: Timers: Solve = 3.352898232 Iter = 3.285005927 Bottom = 0.026892307 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.478245033 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 2728631.974 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0002673480194, 9.797877543e-11 MLMG: Timers: Solve = 0.213662243 Iter = 0.209357225 Bottom = 0.159309412 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728627.802 MLMG: Initial residual (resid0) = 8728.675235 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002210750245, 8.102058634e-11 MLMG: Timers: Solve = 0.13921609 Iter = 0.137186099 Bottom = 0.106195481 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.15755262e+10 MLMG: Initial residual (resid0) = 1.15755262e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002920746803, 2.523208667e-13 MLMG: Timers: Solve = 3.356813954 Iter = 3.281485596 Bottom = 0.027271188 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.194657103 seconds MAC Proj :0.370952531 seconds Nodal Proj :3.466167632 seconds Reactions :0.167741427 seconds Misc :0.113749243 seconds Base State :0.011106695 seconds Time to advance time step: 4.313393458 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.471594173 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308380.202 MLMG: Initial residual (resid0) = 1308380.202 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001222828432, 9.346124547e-11 MLMG: Timers: Solve = 0.213952541 Iter = 0.211834233 Bottom = 0.162453381 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308380.239 MLMG: Initial residual (resid0) = 7.635468327 MLMG: Final Iter. 5 resid, resid/bnorm = 5.796839531e-05, 4.430546531e-11 MLMG: Timers: Solve = 0.131672669 Iter = 0.129659165 Bottom = 0.097807702 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488883.997 MLMG: Initial residual (resid0) = 5488883.997 MLMG: Final Iter. 7 resid, resid/bnorm = 6.844966784e-06, 1.247059837e-12 MLMG: Timers: Solve = 3.366843749 Iter = 3.297369827 Bottom = 0.027234314 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.178006555 seconds MAC Proj :0.357014515 seconds Nodal Proj :3.471620191 seconds Reactions :0.168121585 seconds Misc :0.022110506 seconds Base State :0.013159968 seconds Time to advance time step: 4.197034461 Call to estdt for level 0 gives dt_lev = 0.2012294727 Minimum estdt over all levels = 0.2012294727 Call to estdt at beginning of step 2 gives dt =0.2012294727 dt_growth factor limits the new dt = 0.0005215974653 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1426181.41 MLMG: Initial residual (resid0) = 1426181.41 MLMG: Final Iter. 9 resid, resid/bnorm = 6.142480323e-05, 4.306941797e-11 MLMG: Timers: Solve = 0.231851345 Iter = 0.22969756 Bottom = 0.174196286 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1426291.688 MLMG: Initial residual (resid0) = 36463.44575 MLMG: Final Iter. 9 resid, resid/bnorm = 1.825350583e-05, 1.279787717e-11 MLMG: Timers: Solve = 0.231652358 Iter = 0.229610686 Bottom = 0.174324551 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063485.841 MLMG: Initial residual (resid0) = 6063485.841 MLMG: Final Iter. 9 resid, resid/bnorm = 2.446416468e-05, 4.034670043e-12 MLMG: Timers: Solve = 4.31300939 Iter = 4.245059619 Bottom = 0.034973917 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :0.325118316 seconds MAC Proj :0.474897856 seconds Nodal Proj :4.415260511 seconds Reactions :0.168505892 seconds Misc :0.022997954 seconds Base State :0.011497832 seconds Time to advance time step: 5.406934495 Call to estdt for level 0 gives dt_lev = 0.201266633 Minimum estdt over all levels = 0.201266633 Call to estdt at beginning of step 3 gives dt =0.201266633 dt_growth factor limits the new dt = 0.0005737572118 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1597824.952 MLMG: Initial residual (resid0) = 1597824.952 MLMG: Final Iter. 9 resid, resid/bnorm = 4.194991742e-05, 2.625438873e-11 MLMG: Timers: Solve = 0.24509572 Iter = 0.242960594 Bottom = 0.187665128 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1597946.233 MLMG: Initial residual (resid0) = 399197.4642 MLMG: Final Iter. 9 resid, resid/bnorm = 4.148754596e-05, 2.59630425e-11 MLMG: Timers: Solve = 0.243471078 Iter = 0.241429357 Bottom = 0.186164263 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6669975.861 MLMG: Initial residual (resid0) = 6669975.861 MLMG: Final Iter. 8 resid, resid/bnorm = 3.802966724e-05, 5.701619921e-12 MLMG: Timers: Solve = 3.81620599 Iter = 3.748600527 Bottom = 0.030241282 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :0.184571501 seconds MAC Proj :0.499955795 seconds Nodal Proj :3.991066145 seconds Reactions :0.167883981 seconds Misc :0.093722386 seconds Base State :0.012412944 seconds Time to advance time step: 4.937339726 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.472999062 Total Time: 28.37010335 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7976 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.05-56-g72ef88ee6a1d) finalized