Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.05-96-g38f9ee12c680) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... Calling VariableSetup() Calling set_method_params() Calling BCSetup() Calling BaseStateGeometry::Init() Calling init_base_state_geometry() Calling Init() Calling InitData() initdata model_File = cutoff densities: low density cutoff (for mapping the model) = 1e-10 buoyancy cutoff density (for zeroing rho - rho_0, centrifugal term) = 5e-10 anelastic cutoff = 1e-10 Maximum HSE Error = 4.547473509e-13 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile RT_pltInitData after InitData Time to write plotfile: 0.067827745 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.005218885 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile RT_pltafter_InitProj after InitProj Time to write plotfile: 0.070936519 Call to firstdt for level 0 gives dt_lev = 0.0006089835859 Multiplying dt_lev by init_shrink; dt_lev = 6.089835859e-05 Minimum firstdt over all levels = 6.089835859e-05 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.004939897 Iter = 0 Bottom = 0 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.08660444773 Minimum estdt over all levels = 0.08660444773 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773 Multiplying dt by init_shrink; dt = 0.008660444773 Ignoring this new dt since it's larger than the previous dt = 6.089835859e-05 Writing plotfile RT_pltafter_DivuIter after final DivuIter Time to write plotfile: 0.062378904 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 6.089835859e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 0.002421164472 MLMG: Initial residual (resid0) = 0.002421164472 MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907829e-13, 7.235806776e-11 MLMG: Timers: Solve = 0.076882722 Iter = 0.074560233 Bottom = 0.020019139 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 0.002421205691 MLMG: Initial residual (resid0) = 2.151449931e-06 MLMG: Final Iter. 7 resid, resid/bnorm = 9.927908991e-14, 4.100398833e-11 MLMG: Timers: Solve = 0.058723704 Iter = 0.056732463 Bottom = 0.01443099 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 58.12657035 MLMG: Initial residual (resid0) = 58.12657035 MLMG: Final Iter. 8 resid, resid/bnorm = 6.735945135e-12, 1.158840973e-13 MLMG: Timers: Solve = 0.277505203 Iter = 0.272111883 Bottom = 0.002196247 Done calling nodal solver Timestep 0 ends with TIME = 6.089835859e-05 DT = 6.089835859e-05 Timing summary: Advection :0.102257146 seconds MAC Proj :0.145922462 seconds Nodal Proj :0.297138603 seconds Reactions :0.007797042 seconds Misc :0.011092144 seconds Base State :0.010392205 seconds Time to advance time step: 0.564347079 Writing plotfile 0 after all initialization Time to write plotfile: 0.064368042 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 6.089835859e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2.394238647e-05 MLMG: Initial residual (resid0) = 2.394238647e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 3.183147448e-16, 1.329502993e-11 MLMG: Timers: Solve = 0.07777125 Iter = 0.074908592 Bottom = 0.020482795 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2.394218844e-05 MLMG: Initial residual (resid0) = 1.928423384e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 6.036513706e-16, 2.521287359e-11 MLMG: Timers: Solve = 0.074013784 Iter = 0.072042583 Bottom = 0.017793976 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003539812449 MLMG: Initial residual (resid0) = 0.003539812449 MLMG: Final Iter. 8 resid, resid/bnorm = 4.018053251e-16, 1.13510343e-13 MLMG: Timers: Solve = 0.273370465 Iter = 0.267234923 Bottom = 0.002232793 Done calling nodal solver Timestep 1 ends with TIME = 6.089835859e-05 DT = 6.089835859e-05 Timing summary: Advection :0.122387454 seconds MAC Proj :0.161014567 seconds Nodal Proj :0.293030544 seconds Reactions :0.006960101 seconds Misc :0.020070674 seconds Base State :0.008873921 seconds Time to advance time step: 0.60358951 Call to estdt for level 0 gives dt_lev = 0.3128878797 Minimum estdt over all levels = 0.3128878797 Call to estdt at beginning of step 2 gives dt =0.3128878797 dt_growth factor limits the new dt = 6.698819445e-05 Timestep 2 starts with TIME = 6.089835859e-05 DT = 6.698819445e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.050043585e-05 MLMG: Initial residual (resid0) = 3.050043585e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 2.617769167e-15, 8.582727079e-11 MLMG: Timers: Solve = 0.083020289 Iter = 0.080166618 Bottom = 0.019978992 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.058937698e-05 MLMG: Initial residual (resid0) = 3.366932436e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 1.074458137e-15, 3.5125205e-11 MLMG: Timers: Solve = 0.075015424 Iter = 0.073008672 Bottom = 0.018493839 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003894011863 MLMG: Initial residual (resid0) = 0.003894011863 MLMG: Final Iter. 8 resid, resid/bnorm = 4.460407738e-16, 1.145453043e-13 MLMG: Timers: Solve = 0.272212132 Iter = 0.267102331 Bottom = 0.002204743 Done calling nodal solver Timestep 2 ends with TIME = 0.000127886553 DT = 6.698819445e-05 Timing summary: Advection :0.114191853 seconds MAC Proj :0.167115465 seconds Nodal Proj :0.291864575 seconds Reactions :0.008215254 seconds Misc :0.020217958 seconds Base State :0.00956376 seconds Time to advance time step: 0.601736915 Call to estdt for level 0 gives dt_lev = 0.3130343729 Minimum estdt over all levels = 0.3130343729 Call to estdt at beginning of step 3 gives dt =0.3130343729 dt_growth factor limits the new dt = 7.36870139e-05 Timestep 3 starts with TIME = 0.000127886553 DT = 7.36870139e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.955092471e-05 MLMG: Initial residual (resid0) = 3.955092471e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 3.720068543e-15, 9.405768815e-11 MLMG: Timers: Solve = 0.083089739 Iter = 0.080233914 Bottom = 0.020111994 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.959539494e-05 MLMG: Initial residual (resid0) = 1.25524138e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 9.441723797e-16, 2.384550984e-11 MLMG: Timers: Solve = 0.075671952 Iter = 0.073705311 Bottom = 0.019626968 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004283412997 MLMG: Initial residual (resid0) = 0.004283412997 MLMG: Final Iter. 8 resid, resid/bnorm = 4.883246585e-16, 1.140036365e-13 MLMG: Timers: Solve = 0.27407414 Iter = 0.269050238 Bottom = 0.002889329 Done calling nodal solver Timestep 3 ends with TIME = 0.0002015735669 DT = 7.36870139e-05 Timing summary: Advection :0.098559043 seconds MAC Proj :0.168003866 seconds Nodal Proj :0.301848593 seconds Reactions :0.007936552 seconds Misc :0.019294035 seconds Base State :0.010981019 seconds Time to advance time step: 0.595771058 Call to estdt for level 0 gives dt_lev = 0.3130323766 Minimum estdt over all levels = 0.3130323766 Call to estdt at beginning of step 4 gives dt =0.3130323766 dt_growth factor limits the new dt = 8.105571529e-05 Timestep 4 starts with TIME = 0.0002015735669 DT = 8.105571529e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 5.584764588e-05 MLMG: Initial residual (resid0) = 5.584764588e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 4.629172991e-15, 8.288931284e-11 MLMG: Timers: Solve = 0.082865621 Iter = 0.080055546 Bottom = 0.019915177 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 5.589656388e-05 MLMG: Initial residual (resid0) = 8.595300417e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 1.48844187e-15, 2.662850392e-11 MLMG: Timers: Solve = 0.075599584 Iter = 0.073633648 Bottom = 0.019382795 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004711754539 MLMG: Initial residual (resid0) = 0.004711754539 MLMG: Final Iter. 8 resid, resid/bnorm = 5.355958732e-16, 1.136722783e-13 MLMG: Timers: Solve = 0.272568382 Iter = 0.266604585 Bottom = 0.002214047 Done calling nodal solver Timestep 4 ends with TIME = 0.0002826292822 DT = 8.105571529e-05 Timing summary: Advection :0.117955302 seconds MAC Proj :0.16752693 seconds Nodal Proj :0.291095199 seconds Reactions :0.008614748 seconds Misc :0.022302614 seconds Base State :0.011803836 seconds Time to advance time step: 0.607617805 Call to estdt for level 0 gives dt_lev = 0.3130323437 Minimum estdt over all levels = 0.3130323437 Call to estdt at beginning of step 5 gives dt =0.3130323437 dt_growth factor limits the new dt = 8.916128682e-05 Timestep 5 starts with TIME = 0.0002826292822 DT = 8.916128682e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 7.377430081e-05 MLMG: Initial residual (resid0) = 7.377430081e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 5.493181961e-15, 7.445928867e-11 MLMG: Timers: Solve = 0.083096737 Iter = 0.080380723 Bottom = 0.019843756 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 7.382821261e-05 MLMG: Initial residual (resid0) = 1.268148733e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 6.65393508e-15, 9.012726767e-11 MLMG: Timers: Solve = 0.074168842 Iter = 0.072110329 Bottom = 0.017982105 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.005182930686 MLMG: Initial residual (resid0) = 0.005182930686 MLMG: Final Iter. 8 resid, resid/bnorm = 6.006480036e-16, 1.158896462e-13 MLMG: Timers: Solve = 0.271795464 Iter = 0.266604882 Bottom = 0.002226639 Done calling nodal solver Timestep 5 ends with TIME = 0.000371790569 DT = 8.916128682e-05 Timing summary: Advection :0.138184714 seconds MAC Proj :0.166870265 seconds Nodal Proj :0.292467853 seconds Reactions :0.007403616 seconds Misc :0.019060272 seconds Base State :0.010266444 seconds Time to advance time step: 0.624112521 Writing plotfile 5 Time to write plotfile: 0.064998545 Total Time: 4.186149965 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [RT_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10393 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.05-96-g38f9ee12c680) finalized