Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.05-101-g5738a0a334d5) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... Calling VariableSetup() Calling set_method_params() Calling BCSetup() Calling BaseStateGeometry::Init() Calling init_base_state_geometry() Calling Init() Calling InitData() initdata model_File = cutoff densities: low density cutoff (for mapping the model) = 1e-10 buoyancy cutoff density (for zeroing rho - rho_0, centrifugal term) = 5e-10 anelastic cutoff = 1e-10 Maximum HSE Error = 4.547473509e-13 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile RT_pltInitData after InitData Time to write plotfile: 0.068164428 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.005229853 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile RT_pltafter_InitProj after InitProj Time to write plotfile: 0.066417705 Call to firstdt for level 0 gives dt_lev = 0.0006089835859 Multiplying dt_lev by init_shrink; dt_lev = 6.089835859e-05 Minimum firstdt over all levels = 6.089835859e-05 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.004880622 Iter = 0 Bottom = 0 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.08660444773 Minimum estdt over all levels = 0.08660444773 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773 Multiplying dt by init_shrink; dt = 0.008660444773 Ignoring this new dt since it's larger than the previous dt = 6.089835859e-05 Writing plotfile RT_pltafter_DivuIter after final DivuIter Time to write plotfile: 0.062399411 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 6.089835859e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 0.002421164472 MLMG: Initial residual (resid0) = 0.002421164472 MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907835e-13, 7.235806801e-11 MLMG: Timers: Solve = 0.077745179 Iter = 0.075442812 Bottom = 0.020247306 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 0.002421205691 MLMG: Initial residual (resid0) = 2.151449931e-06 MLMG: Final Iter. 7 resid, resid/bnorm = 9.92790938e-14, 4.100398994e-11 MLMG: Timers: Solve = 0.058635292 Iter = 0.056669791 Bottom = 0.014400845 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 58.12657035 MLMG: Initial residual (resid0) = 58.12657035 MLMG: Final Iter. 8 resid, resid/bnorm = 6.401990049e-12, 1.101387887e-13 MLMG: Timers: Solve = 0.278173549 Iter = 0.272810257 Bottom = 0.00213912 Done calling nodal solver Timestep 0 ends with TIME = 6.089835859e-05 DT = 6.089835859e-05 Timing summary: Advection :0.106074703 seconds MAC Proj :0.153543421 seconds Nodal Proj :0.296861095 seconds Reactions :0.007742996 seconds Misc :0.01123461 seconds Base State :0.011930927 seconds Time to advance time step: 0.575614243 Writing plotfile 0 after all initialization Time to write plotfile: 0.065855879 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 6.089835859e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2.394238647e-05 MLMG: Initial residual (resid0) = 2.394238647e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 3.183556861e-16, 1.329673993e-11 MLMG: Timers: Solve = 0.077955478 Iter = 0.075155603 Bottom = 0.020513023 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2.394218844e-05 MLMG: Initial residual (resid0) = 1.928423333e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 6.036517941e-16, 2.521289128e-11 MLMG: Timers: Solve = 0.074367204 Iter = 0.072385853 Bottom = 0.01788398 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003539812449 MLMG: Initial residual (resid0) = 0.003539812449 MLMG: Final Iter. 8 resid, resid/bnorm = 3.977937771e-16, 1.123770773e-13 MLMG: Timers: Solve = 0.272445305 Iter = 0.266503277 Bottom = 0.002108517 Done calling nodal solver Timestep 1 ends with TIME = 6.089835859e-05 DT = 6.089835859e-05 Timing summary: Advection :0.093419065 seconds MAC Proj :0.161387729 seconds Nodal Proj :0.303746471 seconds Reactions :0.007546414 seconds Misc :0.021376225 seconds Base State :0.010907039 seconds Time to advance time step: 0.58760261 Call to estdt for level 0 gives dt_lev = 0.3128878797 Minimum estdt over all levels = 0.3128878797 Call to estdt at beginning of step 2 gives dt =0.3128878797 dt_growth factor limits the new dt = 6.698819445e-05 Timestep 2 starts with TIME = 6.089835859e-05 DT = 6.698819445e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.050043585e-05 MLMG: Initial residual (resid0) = 3.050043585e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 2.557328972e-15, 8.384565337e-11 MLMG: Timers: Solve = 0.083081451 Iter = 0.080293901 Bottom = 0.019961142 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.058938848e-05 MLMG: Initial residual (resid0) = 1.496350122e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 1.643774831e-15, 5.373676664e-11 MLMG: Timers: Solve = 0.074008764 Iter = 0.072030096 Bottom = 0.017788025 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003894011899 MLMG: Initial residual (resid0) = 0.003894011899 MLMG: Final Iter. 8 resid, resid/bnorm = 4.564491146e-16, 1.172182126e-13 MLMG: Timers: Solve = 0.272045322 Iter = 0.267276421 Bottom = 0.002232491 Done calling nodal solver Timestep 2 ends with TIME = 0.000127886553 DT = 6.698819445e-05 Timing summary: Advection :0.124709497 seconds MAC Proj :0.166294254 seconds Nodal Proj :0.291137118 seconds Reactions :0.00869949 seconds Misc :0.017000572 seconds Base State :0.009514356 seconds Time to advance time step: 0.607984919 Call to estdt for level 0 gives dt_lev = 0.3130342913 Minimum estdt over all levels = 0.3130342913 Call to estdt at beginning of step 3 gives dt =0.3130342913 dt_growth factor limits the new dt = 7.36870139e-05 Timestep 3 starts with TIME = 0.000127886553 DT = 7.36870139e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.955092232e-05 MLMG: Initial residual (resid0) = 3.955092232e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 3.720552172e-15, 9.406992185e-11 MLMG: Timers: Solve = 0.083262608 Iter = 0.080497485 Bottom = 0.02000524 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.959538746e-05 MLMG: Initial residual (resid0) = 1.255234937e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 1.064943184e-15, 2.689563742e-11 MLMG: Timers: Solve = 0.075929794 Iter = 0.073967353 Bottom = 0.019674437 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004283412961 MLMG: Initial residual (resid0) = 0.004283412961 MLMG: Final Iter. 8 resid, resid/bnorm = 4.679416576e-16, 1.092450487e-13 MLMG: Timers: Solve = 0.272938113 Iter = 0.267889262 Bottom = 0.002993517 Done calling nodal solver Timestep 3 ends with TIME = 0.0002015735669 DT = 7.36870139e-05 Timing summary: Advection :0.12328655 seconds MAC Proj :0.168697598 seconds Nodal Proj :0.299425423 seconds Reactions :0.007874131 seconds Misc :0.012740843 seconds Base State :0.013097386 seconds Time to advance time step: 0.612152716 Call to estdt for level 0 gives dt_lev = 0.3130324509 Minimum estdt over all levels = 0.3130324509 Call to estdt at beginning of step 4 gives dt =0.3130324509 dt_growth factor limits the new dt = 8.105571529e-05 Timestep 4 starts with TIME = 0.0002015735669 DT = 8.105571529e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 5.584765297e-05 MLMG: Initial residual (resid0) = 5.584765297e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 4.633806155e-15, 8.297226308e-11 MLMG: Timers: Solve = 0.083932588 Iter = 0.081368917 Bottom = 0.020040375 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 5.58965678e-05 MLMG: Initial residual (resid0) = 8.594643427e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 1.492058701e-15, 2.669320782e-11 MLMG: Timers: Solve = 0.075521519 Iter = 0.0735332 Bottom = 0.019354007 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004711754539 MLMG: Initial residual (resid0) = 0.004711754539 MLMG: Final Iter. 8 resid, resid/bnorm = 5.410168841e-16, 1.148228074e-13 MLMG: Timers: Solve = 0.274680221 Iter = 0.268619823 Bottom = 0.003027904 Done calling nodal solver Timestep 4 ends with TIME = 0.0002826292822 DT = 8.105571529e-05 Timing summary: Advection :0.122953548 seconds MAC Proj :0.168794028 seconds Nodal Proj :0.301320182 seconds Reactions :0.008541898 seconds Misc :0.020516275 seconds Base State :0.009971767 seconds Time to advance time step: 0.622258865 Call to estdt for level 0 gives dt_lev = 0.3130323438 Minimum estdt over all levels = 0.3130323438 Call to estdt at beginning of step 5 gives dt =0.3130323438 dt_growth factor limits the new dt = 8.916128682e-05 Timestep 5 starts with TIME = 0.0002826292822 DT = 8.916128682e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 7.37743008e-05 MLMG: Initial residual (resid0) = 7.37743008e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 5.790844532e-15, 7.849406188e-11 MLMG: Timers: Solve = 0.083021076 Iter = 0.080269867 Bottom = 0.019941586 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 7.382811064e-05 MLMG: Initial residual (resid0) = 1.227093904e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 2.514310592e-15, 3.405627707e-11 MLMG: Timers: Solve = 0.075845337 Iter = 0.073876582 Bottom = 0.01967471 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.005182930402 MLMG: Initial residual (resid0) = 0.005182930402 MLMG: Final Iter. 8 resid, resid/bnorm = 5.85902854e-16, 1.13044708e-13 MLMG: Timers: Solve = 0.271280228 Iter = 0.266503583 Bottom = 0.002102176 Done calling nodal solver Timestep 5 ends with TIME = 0.000371790569 DT = 8.916128682e-05 Timing summary: Advection :0.095278337 seconds MAC Proj :0.167935424 seconds Nodal Proj :0.300371854 seconds Reactions :0.007347335 seconds Misc :0.018343379 seconds Base State :0.012731993 seconds Time to advance time step: 0.589422032 Writing plotfile 5 Time to write plotfile: 0.064977164 Total Time: 4.181096549 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [RT_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10392 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.05-101-g5738a0a334d5) finalized