Initializing CUDA...
CUDA initialized with 1 GPU
AMReX (20.06-27-gf889ad3b6081) initialized
Calling Setup()
Calling ReadParameters()
WARNING: burning_cutoff_density_lo not supplied in the inputs file
WARNING: setting burning_cutoff_density_lo = base_cutoff_density
reading extern runtime parameters ...
Calling VariableSetup()
Initializing Helmholtz EOS and using Coulomb corrections.
Calling set_method_params()
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling init_base_state_geometry()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-3d_pltInitData after InitData
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.547410981
inner sponge: r_sp , r_tp : 186468750, 224718750
Doing initial projection
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.07088707 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.498819284
Call to firstdt for level 0 gives dt_lev = 0.0004741795139
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139
Minimum firstdt over all levels = 0.0004741795139
Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs = 2054.812665
MLMG: Initial residual (resid0) = 2054.812665
MLMG: Final Iter. 7 resid, resid/bnorm = 3.684004213e-10, 1.792866219e-13
MLMG: Timers: Solve = 3.335326123 Iter = 3.266643012 Bottom = 0.027166914
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1719927642
Minimum estdt over all levels = 0.1719927642
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642
Multiplying dt by init_shrink; dt = 0.1719927642
Ignoring this new dt since it's larger than the previous dt = 0.0004741795139
Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.517792234
Doing initial pressure iteration #1
Timestep 0 starts with TIME = 0 DT = 0.0004741795139
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 2728631.974
MLMG: Initial residual (resid0) = 2728631.974
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0002664970234, 9.7666899e-11
MLMG: Timers: Solve = 0.251776308 Iter = 0.24617271 Bottom = 0.193727536
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 2728627.802
MLMG: Initial residual (resid0) = 8728.675245
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002204197226, 8.078042832e-11
MLMG: Timers: Solve = 0.14389262 Iter = 0.141725729 Bottom = 0.110005878
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.15755262e+10
MLMG: Initial residual (resid0) = 1.15755262e+10
MLMG: Final Iter. 7 resid, resid/bnorm = 0.00289952755, 2.504877532e-13
MLMG: Timers: Solve = 3.350412986 Iter = 3.276145025 Bottom = 0.030887839
Done calling nodal solver
Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection :0.211645494 seconds
MAC Proj :0.415682971 seconds
Nodal Proj :3.615422674 seconds
Reactions :0.169167092 seconds
Misc :0.038187708 seconds
Base State :0.013205305 seconds
Time to advance time step: 4.450218962
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.485039271
Calling Evolve()
Timestep 1 starts with TIME = 0 DT = 0.0004741795139
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1308380.202
MLMG: Initial residual (resid0) = 1308380.202
MLMG: Final Iter. 8 resid, resid/bnorm = 0.000124629325, 9.525467049e-11
MLMG: Timers: Solve = 0.234857901 Iter = 0.23264087 Bottom = 0.181429739
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1308380.239
MLMG: Initial residual (resid0) = 7.635505148
MLMG: Final Iter. 5 resid, resid/bnorm = 3.727203181e-05, 2.848715586e-11
MLMG: Timers: Solve = 0.139084681 Iter = 0.136954063 Bottom = 0.105243011
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 5488883.997
MLMG: Initial residual (resid0) = 5488883.997
MLMG: Final Iter. 7 resid, resid/bnorm = 6.844919453e-06, 1.247051214e-12
MLMG: Timers: Solve = 3.341004076 Iter = 3.271602957 Bottom = 0.027313162
Done calling nodal solver
Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection :0.191458707 seconds
MAC Proj :0.386491049 seconds
Nodal Proj :3.447201709 seconds
Reactions :0.169267339 seconds
Misc :0.026856389 seconds
Base State :0.013018357 seconds
Time to advance time step: 4.22140568
Call to estdt for level 0 gives dt_lev = 0.2012294727
Minimum estdt over all levels = 0.2012294727
Call to estdt at beginning of step 2 gives dt =0.2012294727
dt_growth factor limits the new dt = 0.0005215974653
Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1426181.41
MLMG: Initial residual (resid0) = 1426181.41
MLMG: Final Iter. 9 resid, resid/bnorm = 3.356681555e-05, 2.353614717e-11
MLMG: Timers: Solve = 0.230525896 Iter = 0.228292604 Bottom = 0.171600976
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1426291.688
MLMG: Initial residual (resid0) = 36463.44576
MLMG: Final Iter. 9 resid, resid/bnorm = 6.415001391e-05, 4.497678453e-11
MLMG: Timers: Solve = 0.228484517 Iter = 0.226381278 Bottom = 0.169814072
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6063485.841
MLMG: Initial residual (resid0) = 6063485.841
MLMG: Final Iter. 8 resid, resid/bnorm = 5.55669633e-05, 9.164194452e-12
MLMG: Timers: Solve = 3.810710708 Iter = 3.741224356 Bottom = 0.030482297
Done calling nodal solver
Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653
Timing summary:
Advection :0.278594974 seconds
MAC Proj :0.471382286 seconds
Nodal Proj :3.913874477 seconds
Reactions :0.169242099 seconds
Misc :0.024382259 seconds
Base State :0.012982739 seconds
Time to advance time step: 4.857608921
Call to estdt for level 0 gives dt_lev = 0.201266633
Minimum estdt over all levels = 0.201266633
Call to estdt at beginning of step 3 gives dt =0.201266633
dt_growth factor limits the new dt = 0.0005737572118
Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1597824.952
MLMG: Initial residual (resid0) = 1597824.952
MLMG: Final Iter. 9 resid, resid/bnorm = 4.091927849e-05, 2.560936255e-11
MLMG: Timers: Solve = 0.245325226 Iter = 0.243093969 Bottom = 0.186319197
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1597946.233
MLMG: Initial residual (resid0) = 56931.55493
MLMG: Final Iter. 9 resid, resid/bnorm = 4.616452039e-05, 2.888990845e-11
MLMG: Timers: Solve = 0.242844525 Iter = 0.240722482 Bottom = 0.184145711
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6669975.866
MLMG: Initial residual (resid0) = 6669975.866
MLMG: Final Iter. 8 resid, resid/bnorm = 3.280794435e-05, 4.918750085e-12
MLMG: Timers: Solve = 3.815472304 Iter = 3.745857836 Bottom = 0.031985009
Done calling nodal solver
Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118
Timing summary:
Advection :0.401113196 seconds
MAC Proj :0.50013706 seconds
Nodal Proj :3.918007085 seconds
Reactions :0.168840514 seconds
Misc :0.02429749 seconds
Base State :0.013560733 seconds
Time to advance time step: 5.012528692
Writing plotfile 3
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.485032358
Total Time: 28.08258453
Unused ParmParse Variables:
[TOP]::maestro.v(nvals = 1) :: [1]
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
Total GPU global memory (MB): 12066
Free GPU global memory (MB): 7976
[The Arena] space allocated (MB): 9049
[The Arena] space used (MB): 0
[The Device Arena] space allocated (MB): 8
[The Device Arena] space used (MB): 0
[The Managed Arena] space allocated (MB): 8
[The Managed Arena] space used (MB): 0
[The Pinned Arena] space allocated (MB): 8
[The Pinned Arena] space used (MB): 0
AMReX (20.06-27-gf889ad3b6081) finalized