Initializing CUDA...
CUDA initialized with 1 GPU
AMReX (20.06-71-gb3609f062ea6) initialized
Calling Setup()
Calling ReadParameters()
WARNING: burning_cutoff_density_lo not supplied in the inputs file
WARNING: setting burning_cutoff_density_lo = base_cutoff_density
reading extern runtime parameters ...
Calling VariableSetup()
Initializing Helmholtz EOS and using Coulomb corrections.
Calling set_method_params()
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling init_base_state_geometry()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-3d_pltInitData after InitData
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.592878743
inner sponge: r_sp , r_tp : 186468750, 224718750
Doing initial projection
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.070292338 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.514464945
Call to firstdt for level 0 gives dt_lev = 0.0004741795139
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139
Minimum firstdt over all levels = 0.0004741795139
Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs = 2054.812665
MLMG: Initial residual (resid0) = 2054.812665
MLMG: Final Iter. 7 resid, resid/bnorm = 3.679740956e-10, 1.790791452e-13
MLMG: Timers: Solve = 3.344539333 Iter = 3.27617386 Bottom = 0.026428278
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1719927642
Minimum estdt over all levels = 0.1719927642
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642
Multiplying dt by init_shrink; dt = 0.1719927642
Ignoring this new dt since it's larger than the previous dt = 0.0004741795139
Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.492643726
Doing initial pressure iteration #1
Timestep 0 starts with TIME = 0 DT = 0.0004741795139
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 2728631.974
MLMG: Initial residual (resid0) = 2728631.974
MLMG: Final Iter. 9 resid, resid/bnorm = 1.713167876e-05, 6.278486408e-12
MLMG: Timers: Solve = 0.252020338 Iter = 0.246606818 Bottom = 0.189925633
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 2728627.802
MLMG: Initial residual (resid0) = 8728.675116
MLMG: Final Iter. 5 resid, resid/bnorm = 0.000255963183, 9.38065583e-11
MLMG: Timers: Solve = 0.148267854 Iter = 0.146209442 Bottom = 0.115054611
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.15755262e+10
MLMG: Initial residual (resid0) = 1.15755262e+10
MLMG: Final Iter. 7 resid, resid/bnorm = 0.003015637398, 2.605183856e-13
MLMG: Timers: Solve = 3.354310234 Iter = 3.277728312 Bottom = 0.028819272
Done calling nodal solver
Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection :0.204081993 seconds
MAC Proj :0.419732977 seconds
Nodal Proj :3.466306624 seconds
Reactions :0.168345869 seconds
Misc :0.104403138 seconds
Base State :0.01099522 seconds
Time to advance time step: 4.362984112
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.482937918
Calling Evolve()
Timestep 1 starts with TIME = 0 DT = 0.0004741795139
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1308380.202
MLMG: Initial residual (resid0) = 1308380.202
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001239716657, 9.4752019e-11
MLMG: Timers: Solve = 0.212838535 Iter = 0.210723474 Bottom = 0.160933138
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1308380.239
MLMG: Initial residual (resid0) = 7.635492793
MLMG: Final Iter. 5 resid, resid/bnorm = 4.749483914e-05, 3.630048644e-11
MLMG: Timers: Solve = 0.142556742 Iter = 0.140461906 Bottom = 0.109245724
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 5488883.997
MLMG: Initial residual (resid0) = 5488883.997
MLMG: Final Iter. 7 resid, resid/bnorm = 6.844917469e-06, 1.247050853e-12
MLMG: Timers: Solve = 3.35919465 Iter = 3.290980871 Bottom = 0.027007571
Done calling nodal solver
Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection :0.180606724 seconds
MAC Proj :0.366632107 seconds
Nodal Proj :3.460809984 seconds
Reactions :0.167874899 seconds
Misc :0.093511332 seconds
Base State :0.010347054 seconds
Time to advance time step: 4.269582035
Call to estdt for level 0 gives dt_lev = 0.2012294727
Minimum estdt over all levels = 0.2012294727
Call to estdt at beginning of step 2 gives dt =0.2012294727
dt_growth factor limits the new dt = 0.0005215974653
Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1426181.41
MLMG: Initial residual (resid0) = 1426181.41
MLMG: Final Iter. 9 resid, resid/bnorm = 3.073737294e-05, 2.15522182e-11
MLMG: Timers: Solve = 0.228238273 Iter = 0.226017053 Bottom = 0.169905616
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1426237.878
MLMG: Initial residual (resid0) = 189521.0562
MLMG: Final Iter. 9 resid, resid/bnorm = 8.450586616e-05, 5.925089178e-11
MLMG: Timers: Solve = 0.22534179 Iter = 0.223203941 Bottom = 0.167180734
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6063637.817
MLMG: Initial residual (resid0) = 6063637.817
MLMG: Final Iter. 8 resid, resid/bnorm = 3.793348513e-05, 6.255895598e-12
MLMG: Timers: Solve = 3.806613117 Iter = 3.73853356 Bottom = 0.030273063
Done calling nodal solver
Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653
Timing summary:
Advection :0.178194478 seconds
MAC Proj :0.465112124 seconds
Nodal Proj :3.908325276 seconds
Reactions :0.167873081 seconds
Misc :0.097006447 seconds
Base State :0.010234323 seconds
Time to advance time step: 4.816631041
Call to estdt for level 0 gives dt_lev = 0.2012748794
Minimum estdt over all levels = 0.2012748794
Call to estdt at beginning of step 3 gives dt =0.2012748794
dt_growth factor limits the new dt = 0.0005737572118
Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1597937.788
MLMG: Initial residual (resid0) = 1597937.788
MLMG: Final Iter. 9 resid, resid/bnorm = 4.147941068e-05, 2.59580886e-11
MLMG: Timers: Solve = 0.234601731 Iter = 0.232533767 Bottom = 0.176816237
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1598059.069
MLMG: Initial residual (resid0) = 56913.19784
MLMG: Final Iter. 9 resid, resid/bnorm = 4.149671381e-05, 2.596694616e-11
MLMG: Timers: Solve = 0.250385297 Iter = 0.248322877 Bottom = 0.192610678
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6669823.89
MLMG: Initial residual (resid0) = 6669823.89
MLMG: Final Iter. 8 resid, resid/bnorm = 1.675322911e-05, 2.511794822e-12
MLMG: Timers: Solve = 3.811680084 Iter = 3.743570152 Bottom = 0.032467188
Done calling nodal solver
Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118
Timing summary:
Advection :0.180316695 seconds
MAC Proj :0.496225298 seconds
Nodal Proj :3.912444433 seconds
Reactions :0.167932502 seconds
Misc :0.095829708 seconds
Base State :0.01224631 seconds
Time to advance time step: 4.852886635
Writing plotfile 3
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.549210483
Total Time: 27.99285574
Unused ParmParse Variables:
[TOP]::maestro.v(nvals = 1) :: [1]
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
Total GPU global memory (MB): 12066
Free GPU global memory (MB): 7986
[The Arena] space allocated (MB): 9049
[The Arena] space used (MB): 0
[The Device Arena] space allocated (MB): 8
[The Device Arena] space used (MB): 0
[The Managed Arena] space allocated (MB): 8
[The Managed Arena] space used (MB): 0
[The Pinned Arena] space allocated (MB): 8
[The Pinned Arena] space used (MB): 0
AMReX (20.06-71-gb3609f062ea6) finalized