Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.07-18-g6175b18620ed) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... Calling VariableSetup() Calling set_method_params() Calling BCSetup() Calling BaseStateGeometry::Init() Calling init_base_state_geometry() Calling Init() Calling InitData() initdata model_File = cutoff densities: low density cutoff (for mapping the model) = 1e-10 buoyancy cutoff density (for zeroing rho - rho_0, centrifugal term) = 5e-10 anelastic cutoff = 1e-10 Maximum HSE Error = 4.547473509e-13 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile RT_pltInitData after InitData Time to write plotfile: 0.069132009 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.005069795 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile RT_pltafter_InitProj after InitProj Time to write plotfile: 0.0647719 Call to firstdt for level 0 gives dt_lev = 0.0006089835859 Multiplying dt_lev by init_shrink; dt_lev = 6.089835859e-05 Minimum firstdt over all levels = 6.089835859e-05 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.004892618 Iter = 0 Bottom = 0 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.08660444773 Minimum estdt over all levels = 0.08660444773 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773 Multiplying dt by init_shrink; dt = 0.008660444773 Ignoring this new dt since it's larger than the previous dt = 6.089835859e-05 Writing plotfile RT_pltafter_DivuIter after final DivuIter Time to write plotfile: 0.062688751 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 6.089835859e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 0.002421164472 MLMG: Initial residual (resid0) = 0.002421164472 MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907826e-13, 7.235806765e-11 MLMG: Timers: Solve = 0.074197376 Iter = 0.072004064 Bottom = 0.019400994 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 0.002421205691 MLMG: Initial residual (resid0) = 2.151449931e-06 MLMG: Final Iter. 7 resid, resid/bnorm = 9.927909086e-14, 4.100398873e-11 MLMG: Timers: Solve = 0.056652729 Iter = 0.054727227 Bottom = 0.013954137 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 58.12657035 MLMG: Initial residual (resid0) = 58.12657035 MLMG: Final Iter. 8 resid, resid/bnorm = 6.686207144e-12, 1.150284131e-13 MLMG: Timers: Solve = 0.276943427 Iter = 0.271333316 Bottom = 0.00222634 Done calling nodal solver Timestep 0 ends with TIME = 6.089835859e-05 DT = 6.089835859e-05 Timing summary: Advection :0.093453394 seconds MAC Proj :0.140514063 seconds Nodal Proj :0.302108921 seconds Reactions :0.007234242 seconds Misc :0.016874516 seconds Base State :0.011056296 seconds Time to advance time step: 0.560353909 Writing plotfile 0 after all initialization Time to write plotfile: 0.080333035 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 6.089835859e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2.394238647e-05 MLMG: Initial residual (resid0) = 2.394238647e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 3.181898676e-16, 1.328981419e-11 MLMG: Timers: Solve = 0.074914497 Iter = 0.072306276 Bottom = 0.01971553 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2.394218844e-05 MLMG: Initial residual (resid0) = 1.92842354e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 6.036513706e-16, 2.521287359e-11 MLMG: Timers: Solve = 0.071715862 Iter = 0.069606044 Bottom = 0.0171602 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003539812449 MLMG: Initial residual (resid0) = 0.003539812449 MLMG: Final Iter. 8 resid, resid/bnorm = 3.898791012e-16, 1.101411747e-13 MLMG: Timers: Solve = 0.324425734 Iter = 0.316316137 Bottom = 0.002735769 Done calling nodal solver Timestep 1 ends with TIME = 6.089835859e-05 DT = 6.089835859e-05 Timing summary: Advection :0.097870906 seconds MAC Proj :0.155668505 seconds Nodal Proj :0.356053273 seconds Reactions :0.007025079 seconds Misc :0.018024765 seconds Base State :0.010506389 seconds Time to advance time step: 0.634822553 Call to estdt for level 0 gives dt_lev = 0.3128878797 Minimum estdt over all levels = 0.3128878797 Call to estdt at beginning of step 2 gives dt =0.3128878797 dt_growth factor limits the new dt = 6.698819445e-05 Timestep 2 starts with TIME = 6.089835859e-05 DT = 6.698819445e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.050043585e-05 MLMG: Initial residual (resid0) = 3.050043585e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 2.617769895e-15, 8.582729465e-11 MLMG: Timers: Solve = 0.08000628 Iter = 0.07738236 Bottom = 0.019170447 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.058937698e-05 MLMG: Initial residual (resid0) = 3.366932436e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 1.074458188e-15, 3.512520666e-11 MLMG: Timers: Solve = 0.071869084 Iter = 0.069930917 Bottom = 0.0177021 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003894011863 MLMG: Initial residual (resid0) = 0.003894011863 MLMG: Final Iter. 8 resid, resid/bnorm = 4.308619433e-16, 1.106473114e-13 MLMG: Timers: Solve = 0.272668568 Iter = 0.268047358 Bottom = 0.002288752 Done calling nodal solver Timestep 2 ends with TIME = 0.000127886553 DT = 6.698819445e-05 Timing summary: Advection :0.090867604 seconds MAC Proj :0.160602094 seconds Nodal Proj :0.292079635 seconds Reactions :0.007733268 seconds Misc :0.010444362 seconds Base State :0.008839195 seconds Time to advance time step: 0.561898325 Call to estdt for level 0 gives dt_lev = 0.3130343729 Minimum estdt over all levels = 0.3130343729 Call to estdt at beginning of step 3 gives dt =0.3130343729 dt_growth factor limits the new dt = 7.36870139e-05 Timestep 3 starts with TIME = 0.000127886553 DT = 7.36870139e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.955092471e-05 MLMG: Initial residual (resid0) = 3.955092471e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 3.720068596e-15, 9.405768949e-11 MLMG: Timers: Solve = 0.080442627 Iter = 0.077803804 Bottom = 0.019390197 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.959539494e-05 MLMG: Initial residual (resid0) = 3.050486128e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 8.32731643e-16, 2.103102253e-11 MLMG: Timers: Solve = 0.079396505 Iter = 0.077464394 Bottom = 0.019333639 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004283412997 MLMG: Initial residual (resid0) = 0.004283412997 MLMG: Final Iter. 8 resid, resid/bnorm = 4.974319567e-16, 1.161298145e-13 MLMG: Timers: Solve = 0.271864159 Iter = 0.267260991 Bottom = 0.002290488 Done calling nodal solver Timestep 3 ends with TIME = 0.0002015735669 DT = 7.36870139e-05 Timing summary: Advection :0.113956037 seconds MAC Proj :0.168780765 seconds Nodal Proj :0.291357965 seconds Reactions :0.006536276 seconds Misc :0.017067617 seconds Base State :0.009314644 seconds Time to advance time step: 0.597853465 Call to estdt for level 0 gives dt_lev = 0.3130323769 Minimum estdt over all levels = 0.3130323769 Call to estdt at beginning of step 4 gives dt =0.3130323769 dt_growth factor limits the new dt = 8.105571529e-05 Timestep 4 starts with TIME = 0.0002015735669 DT = 8.105571529e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 5.584763516e-05 MLMG: Initial residual (resid0) = 5.584763516e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 4.58481909e-15, 8.209513395e-11 MLMG: Timers: Solve = 0.08013349 Iter = 0.077554284 Bottom = 0.019323216 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.581450096e-05 MLMG: Initial residual (resid0) = 4.831410841e-05 MLMG: Final Iter. 11 resid, resid/resid0 = 5.633244496e-16, 1.165962631e-11 MLMG: Timers: Solve = 0.087245705 Iter = 0.085328356 Bottom = 0.02145779 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004711754536 MLMG: Initial residual (resid0) = 0.004711754536 MLMG: Final Iter. 8 resid, resid/bnorm = 5.186823193e-16, 1.100826275e-13 MLMG: Timers: Solve = 0.273973624 Iter = 0.267748032 Bottom = 0.002516153 Done calling nodal solver Timestep 4 ends with TIME = 0.0002826292822 DT = 8.105571529e-05 Timing summary: Advection :0.148564743 seconds MAC Proj :0.175981543 seconds Nodal Proj :0.292850411 seconds Reactions :0.007223932 seconds Misc :0.010239833 seconds Base State :0.008194866 seconds Time to advance time step: 0.635009352 Call to estdt for level 0 gives dt_lev = 0.3130323447 Minimum estdt over all levels = 0.3130323447 Call to estdt at beginning of step 5 gives dt =0.3130323447 dt_growth factor limits the new dt = 8.916128682e-05 Timestep 5 starts with TIME = 0.0002826292822 DT = 8.916128682e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 7.377563608e-05 MLMG: Initial residual (resid0) = 7.377563608e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 6.218164157e-15, 8.428479221e-11 MLMG: Timers: Solve = 0.079870739 Iter = 0.077182005 Bottom = 0.019029369 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 6.830967791e-05 MLMG: Initial residual (resid0) = 6.548120473e-05 MLMG: Final Iter. 11 resid, resid/bnorm = 1.065940036e-15, 1.560452441e-11 MLMG: Timers: Solve = 0.08721333 Iter = 0.085296336 Bottom = 0.021255331 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.005182930396 MLMG: Initial residual (resid0) = 0.005182930396 MLMG: Final Iter. 8 resid, resid/bnorm = 5.646524914e-16, 1.08944641e-13 MLMG: Timers: Solve = 0.272075704 Iter = 0.267386785 Bottom = 0.00215953 Done calling nodal solver Timestep 5 ends with TIME = 0.000371790569 DT = 8.916128682e-05 Timing summary: Advection :0.092651254 seconds MAC Proj :0.17605073 seconds Nodal Proj :0.300156481 seconds Reactions :0.006429478 seconds Misc :0.016796009 seconds Base State :0.010380837 seconds Time to advance time step: 0.59223869 Writing plotfile 5 Time to write plotfile: 0.066549221 Total Time: 4.179549065 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [RT_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10355 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.07-18-g6175b18620ed) finalized