Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.07-107-g94961adbaf07) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... Calling VariableSetup() Calling set_method_params() Calling BCSetup() Calling BaseStateGeometry::Init() Calling init_base_state_geometry() Calling Init() Calling InitData() initdata model_File = cutoff densities: low density cutoff (for mapping the model) = 1e-10 buoyancy cutoff density (for zeroing rho - rho_0, centrifugal term) = 5e-10 anelastic cutoff = 1e-10 Maximum HSE Error = 4.547473509e-13 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile RT_pltInitData after InitData Time to write plotfile: 0.069974868 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.005252372 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile RT_pltafter_InitProj after InitProj Time to write plotfile: 0.064880125 Call to firstdt for level 0 gives dt_lev = 0.0006089835859 Multiplying dt_lev by init_shrink; dt_lev = 6.089835859e-05 Minimum firstdt over all levels = 6.089835859e-05 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.004915436 Iter = 0 Bottom = 0 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.08660444773 Minimum estdt over all levels = 0.08660444773 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773 Multiplying dt by init_shrink; dt = 0.008660444773 Ignoring this new dt since it's larger than the previous dt = 6.089835859e-05 Writing plotfile RT_pltafter_DivuIter after final DivuIter Time to write plotfile: 0.063052464 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 6.089835859e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 0.002421164472 MLMG: Initial residual (resid0) = 0.002421164472 MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907822e-13, 7.235806746e-11 MLMG: Timers: Solve = 0.07419551 Iter = 0.072011999 Bottom = 0.019338655 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 0.002421205691 MLMG: Initial residual (resid0) = 2.151449931e-06 MLMG: Final Iter. 7 resid, resid/bnorm = 9.927909128e-14, 4.10039889e-11 MLMG: Timers: Solve = 0.056478076 Iter = 0.054555621 Bottom = 0.014011672 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 58.12657035 MLMG: Initial residual (resid0) = 58.12657035 MLMG: Final Iter. 8 resid, resid/bnorm = 6.622258297e-12, 1.139282476e-13 MLMG: Timers: Solve = 0.274131701 Iter = 0.268494948 Bottom = 0.002178846 Done calling nodal solver Timestep 0 ends with TIME = 6.089835859e-05 DT = 6.089835859e-05 Timing summary: Advection :0.099397233 seconds MAC Proj :0.150301725 seconds Nodal Proj :0.302622678 seconds Reactions :0.006925061 seconds Misc :0.009505659 seconds Base State :0.010664222 seconds Time to advance time step: 0.568901493 Writing plotfile 0 after all initialization Time to write plotfile: 0.065518817 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 6.089835859e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2.394238647e-05 MLMG: Initial residual (resid0) = 2.394238647e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 3.183325133e-16, 1.329577207e-11 MLMG: Timers: Solve = 0.074840617 Iter = 0.072065812 Bottom = 0.019805397 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2.394218844e-05 MLMG: Initial residual (resid0) = 1.928423356e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 6.036517941e-16, 2.521289128e-11 MLMG: Timers: Solve = 0.071111937 Iter = 0.069189085 Bottom = 0.01712549 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003539812449 MLMG: Initial residual (resid0) = 0.003539812449 MLMG: Final Iter. 8 resid, resid/bnorm = 4.059252934e-16, 1.146742375e-13 MLMG: Timers: Solve = 0.273585675 Iter = 0.267766625 Bottom = 0.002116163 Done calling nodal solver Timestep 1 ends with TIME = 6.089835859e-05 DT = 6.089835859e-05 Timing summary: Advection :0.090469203 seconds MAC Proj :0.154816377 seconds Nodal Proj :0.300819071 seconds Reactions :0.006661651 seconds Misc :0.017129729 seconds Base State :0.009681007 seconds Time to advance time step: 0.570033825 Call to estdt for level 0 gives dt_lev = 0.3128878797 Minimum estdt over all levels = 0.3128878797 Call to estdt at beginning of step 2 gives dt =0.3128878797 dt_growth factor limits the new dt = 6.698819445e-05 Timestep 2 starts with TIME = 6.089835859e-05 DT = 6.698819445e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.050043585e-05 MLMG: Initial residual (resid0) = 3.050043585e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 2.488971197e-15, 8.160444686e-11 MLMG: Timers: Solve = 0.079884623 Iter = 0.077213865 Bottom = 0.019153048 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.058944204e-05 MLMG: Initial residual (resid0) = 4.060053049e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 7.553890646e-16, 2.46944375e-11 MLMG: Timers: Solve = 0.072722509 Iter = 0.070786737 Bottom = 0.018618115 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003894011945 MLMG: Initial residual (resid0) = 0.003894011945 MLMG: Final Iter. 8 resid, resid/bnorm = 4.531965081e-16, 1.16382927e-13 MLMG: Timers: Solve = 0.272659398 Iter = 0.267826502 Bottom = 0.002212641 Done calling nodal solver Timestep 2 ends with TIME = 0.000127886553 DT = 6.698819445e-05 Timing summary: Advection :0.131124834 seconds MAC Proj :0.161531374 seconds Nodal Proj :0.300137293 seconds Reactions :0.007851672 seconds Misc :0.028537124 seconds Base State :0.011345164 seconds Time to advance time step: 0.629331003 Call to estdt for level 0 gives dt_lev = 0.3130334216 Minimum estdt over all levels = 0.3130334216 Call to estdt at beginning of step 3 gives dt =0.3130334216 dt_growth factor limits the new dt = 7.36870139e-05 Timestep 3 starts with TIME = 0.000127886553 DT = 7.36870139e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.955087115e-05 MLMG: Initial residual (resid0) = 3.955087115e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 3.694313474e-15, 9.340662712e-11 MLMG: Timers: Solve = 0.07996502 Iter = 0.077110263 Bottom = 0.019295964 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.959533952e-05 MLMG: Initial residual (resid0) = 1.255233578e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 9.486752069e-16, 2.395926435e-11 MLMG: Timers: Solve = 0.073257715 Iter = 0.071242656 Bottom = 0.019072346 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004283412915 MLMG: Initial residual (resid0) = 0.004283412915 MLMG: Final Iter. 8 resid, resid/bnorm = 4.902762224e-16, 1.144592483e-13 MLMG: Timers: Solve = 0.273409839 Iter = 0.268438158 Bottom = 0.002399549 Done calling nodal solver Timestep 3 ends with TIME = 0.0002015735669 DT = 7.36870139e-05 Timing summary: Advection :0.082874597 seconds MAC Proj :0.162167232 seconds Nodal Proj :0.295081458 seconds Reactions :0.006576101 seconds Misc :0.018446491 seconds Base State :0.00967608 seconds Time to advance time step: 0.565267469 Call to estdt for level 0 gives dt_lev = 0.3130332415 Minimum estdt over all levels = 0.3130332415 Call to estdt at beginning of step 4 gives dt =0.3130332415 dt_growth factor limits the new dt = 8.105571529e-05 Timestep 4 starts with TIME = 0.0002015735669 DT = 8.105571529e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 5.584767505e-05 MLMG: Initial residual (resid0) = 5.584767505e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 4.64294969e-15, 8.313595304e-11 MLMG: Timers: Solve = 0.079711343 Iter = 0.077150766 Bottom = 0.019300608 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 5.589659305e-05 MLMG: Initial residual (resid0) = 8.595353531e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 2.790901357e-15, 4.992972208e-11 MLMG: Timers: Solve = 0.072066346 Iter = 0.070152613 Bottom = 0.018054111 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004711754539 MLMG: Initial residual (resid0) = 0.004711754539 MLMG: Final Iter. 8 resid, resid/bnorm = 5.258380537e-16, 1.116013258e-13 MLMG: Timers: Solve = 0.273732579 Iter = 0.267904146 Bottom = 0.002128651 Done calling nodal solver Timestep 4 ends with TIME = 0.0002826292822 DT = 8.105571529e-05 Timing summary: Advection :0.120296942 seconds MAC Proj :0.16063244 seconds Nodal Proj :0.303319288 seconds Reactions :0.008425582 seconds Misc :0.010385582 seconds Base State :0.010091012 seconds Time to advance time step: 0.603195157 Call to estdt for level 0 gives dt_lev = 0.3130323437 Minimum estdt over all levels = 0.3130323437 Call to estdt at beginning of step 5 gives dt =0.3130323437 dt_growth factor limits the new dt = 8.916128682e-05 Timestep 5 starts with TIME = 0.0002826292822 DT = 8.916128682e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 7.377437637e-05 MLMG: Initial residual (resid0) = 7.377437637e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 5.376407934e-15, 7.287635895e-11 MLMG: Timers: Solve = 0.081330088 Iter = 0.078667217 Bottom = 0.01925705 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 7.382821279e-05 MLMG: Initial residual (resid0) = 6.122832003e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 1.74062576e-15, 2.357670184e-11 MLMG: Timers: Solve = 0.078465658 Iter = 0.076527257 Bottom = 0.018584911 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.005182930686 MLMG: Initial residual (resid0) = 0.005182930686 MLMG: Final Iter. 8 resid, resid/bnorm = 6.049848122e-16, 1.167263946e-13 MLMG: Timers: Solve = 0.272280376 Iter = 0.267670691 Bottom = 0.00212921 Done calling nodal solver Timestep 5 ends with TIME = 0.000371790569 DT = 8.916128682e-05 Timing summary: Advection :0.097347108 seconds MAC Proj :0.16874697 seconds Nodal Proj :0.302008354 seconds Reactions :0.006483804 seconds Misc :0.009881784 seconds Base State :0.011727342 seconds Time to advance time step: 0.584620327 Writing plotfile 5 Time to write plotfile: 0.065020466 Total Time: 4.107167536 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [RT_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10353 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.07-107-g94961adbaf07) finalized