Initializing CUDA...
CUDA initialized with 1 GPU
AMReX (20.12-54-g2f9277a64058) initialized
Calling Setup()
Calling ReadParameters()
WARNING: burning_cutoff_density_lo not supplied in the inputs file
WARNING: setting burning_cutoff_density_lo = base_cutoff_density
reading extern runtime parameters ...
Calling VariableSetup()
Initializing Helmholtz EOS and using Coulomb corrections.
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
model file mapping, level: 1
dr of MAESTRO base state = 281250.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 729
radius at r_cutoff 205171875
Maximum HSE Error = 0.500936
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.210653934
inner sponge: r_sp , r_tp : 186468750, 224718750
Doing initial projection
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.014782822 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.190251845
Call to firstdt for level 0 gives dt_lev = 0.0004741795922
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922
Call to firstdt for level 1 gives dt_lev = 0.0002743178815
Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815
Minimum firstdt over all levels = 0.0002743178815
Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs = 9701.829851
MLMG: Initial residual (resid0) = 9701.829851
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003233579053, 3.332957909e-08
MLMG: Timers: Solve = 0.415765612 Iter = 0.40160992 Bottom = 0.001488842
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1641628699
Call to estdt for level 1 gives dt_lev = 0.1158500464
Minimum estdt over all levels = 0.1158500464
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464
Multiplying dt by init_shrink; dt = 0.1158500464
Ignoring this new dt since it's larger than the previous dt = 0.0002743178815
Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.187004472
Doing initial pressure iteration #1
Timestep 0 starts with TIME = 0 DT = 0.0002743178815
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1769558.576
MLMG: Initial residual (resid0) = 1769558.576
MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462610222, 8.26539591e-10
MLMG: Timers: Solve = 0.078601522 Iter = 0.072608008 Bottom = 0.018494509
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1769557.101
MLMG: Initial residual (resid0) = 12562.98214
MLMG: Final Iter. 4 resid, resid/bnorm = 0.0003393781526, 1.917870593e-10
MLMG: Timers: Solve = 0.044140811 Iter = 0.040309496 Bottom = 0.009147742
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.293088754e+10
MLMG: Initial residual (resid0) = 1.293088754e+10
MLMG: Final Iter. 9 resid, resid/bnorm = 0.05360794067, 4.145727855e-12
MLMG: Timers: Solve = 0.740844953 Iter = 0.724239017 Bottom = 0.002814248
Done calling nodal solver
Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815
Timing summary:
Advection :0.319635813 seconds
MAC Proj :0.151043987 seconds
Nodal Proj :0.789943009 seconds
Reactions :0.04517117 seconds
Misc :0.026335772 seconds
Base State :0.024189052 seconds
Time to advance time step: 1.332460274
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.184986491
Writing checkpoint 0 after all initialization
Writing checkpoint reacting_bubble_2d_chk0000000
Calling Evolve()
Timestep 1 starts with TIME = 0 DT = 0.0002743178815
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 484084.2372
MLMG: Initial residual (resid0) = 484084.2372
MLMG: Final Iter. 7 resid, resid/bnorm = 3.840936784e-05, 7.93443886e-11
MLMG: Timers: Solve = 0.077272561 Iter = 0.073285384 Bottom = 0.01845634
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 484084.2266
MLMG: Initial residual (resid0) = 15.74076966
MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002645274329, 5.464491886e-10
MLMG: Timers: Solve = 0.035669214 Iter = 0.031879858 Bottom = 0.007491813
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 3547174.999
MLMG: Initial residual (resid0) = 3547174.999
MLMG: Final Iter. 9 resid, resid/bnorm = 1.470372081e-05, 4.145191826e-12
MLMG: Timers: Solve = 0.736765839 Iter = 0.722002713 Bottom = 0.002824541
Done calling nodal solver
Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815
Timing summary:
Advection :0.321158607 seconds
MAC Proj :0.139654347 seconds
Nodal Proj :0.784367268 seconds
Reactions :0.04459397 seconds
Misc :0.026831834 seconds
Base State :0.023840284 seconds
Time to advance time step: 1.316913728
Call to estdt for level 0 gives dt_lev = 0.2285161774
Call to estdt for level 1 gives dt_lev = 0.1613599181
Minimum estdt over all levels = 0.1613599181
Call to estdt at beginning of step 2 gives dt =0.1613599181
dt_growth factor limits the new dt = 0.0003017496696
Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 709087.2088
MLMG: Initial residual (resid0) = 709087.2088
MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005366309863, 7.567912376e-10
MLMG: Timers: Solve = 0.065770008 Iter = 0.061968266 Bottom = 0.016020135
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 709086.623
MLMG: Initial residual (resid0) = 129230.7288
MLMG: Final Iter. 5 resid, resid/bnorm = 9.585537077e-05, 1.351814682e-10
MLMG: Timers: Solve = 0.054968913 Iter = 0.0509375 Bottom = 0.011739839
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 3903892.246
MLMG: Initial residual (resid0) = 3903892.246
MLMG: Final Iter. 9 resid, resid/bnorm = 1.621991396e-05, 4.154805752e-12
MLMG: Timers: Solve = 0.737792256 Iter = 0.723243487 Bottom = 0.002792916
Done calling nodal solver
Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696
Timing summary:
Advection :0.346215145 seconds
MAC Proj :0.148556571 seconds
Nodal Proj :0.784058368 seconds
Reactions :0.045803592 seconds
Misc :0.034582893 seconds
Base State :0.023390262 seconds
Time to advance time step: 1.359594299
Time to regrid: 0.01906126
Call to estdt for level 0 gives dt_lev = 0.2285277611
Call to estdt for level 1 gives dt_lev = 0.161379943
Minimum estdt over all levels = 0.161379943
Call to estdt at beginning of step 3 gives dt =0.161379943
dt_growth factor limits the new dt = 0.0003319246366
Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1070293.273
MLMG: Initial residual (resid0) = 1070293.273
MLMG: Final Iter. 6 resid, resid/bnorm = 0.000579400541, 5.413474564e-10
MLMG: Timers: Solve = 0.065643867 Iter = 0.061855213 Bottom = 0.015905101
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1070292.629
MLMG: Initial residual (resid0) = 47909.95943
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0001436931878, 1.342559819e-10
MLMG: Timers: Solve = 0.053244873 Iter = 0.049458035 Bottom = 0.010842083
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 4294280.634
MLMG: Initial residual (resid0) = 4294280.634
MLMG: Final Iter. 9 resid, resid/bnorm = 1.787021756e-05, 4.161399564e-12
MLMG: Timers: Solve = 0.736813682 Iter = 0.722240862 Bottom = 0.002621194
Done calling nodal solver
Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366
Timing summary:
Advection :0.336550903 seconds
MAC Proj :0.145854066 seconds
Nodal Proj :0.80266234 seconds
Reactions :0.044581277 seconds
Misc :0.030126998 seconds
Base State :0.022996791 seconds
Time to advance time step: 1.360146743
Writing plotfile 3
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.188024193
Writing checkpoint 3
Writing checkpoint reacting_bubble_2d_chk0000003
Total Time: 10.29646783
Unused ParmParse Variables:
[TOP]::maestro.v(nvals = 1) :: [1]
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
Total GPU global memory (MB): 12066
Free GPU global memory (MB): 10126
[The Arena] space allocated (MB): 9049
[The Arena] space used (MB): 0
[The Device Arena] space allocated (MB): 8
[The Device Arena] space used (MB): 0
[The Managed Arena] space allocated (MB): 8
[The Managed Arena] space used (MB): 0
[The Pinned Arena] space allocated (MB): 8
[The Pinned Arena] space used (MB): 0
AMReX (20.12-54-g2f9277a64058) finalized