Initializing CUDA...
CUDA initialized with 1 GPU
AMReX (21.02-37-g327c62b150bb) initialized
Calling Setup()
Calling ReadParameters()
WARNING: burning_cutoff_density_lo not supplied in the inputs file
WARNING: setting burning_cutoff_density_lo = base_cutoff_density
reading extern runtime parameters ...
Calling VariableSetup()
Initializing Helmholtz EOS and using Coulomb corrections.
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
model file mapping, level: 1
dr of MAESTRO base state = 281250.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 729
radius at r_cutoff 205171875
Maximum HSE Error = 0.500936
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.198153765
inner sponge: r_sp , r_tp : 186468750, 224718750
Doing initial projection
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.013625358 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.179487713
Call to firstdt for level 0 gives dt_lev = 0.0004741795922
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922
Call to firstdt for level 1 gives dt_lev = 0.0002743178815
Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815
Minimum firstdt over all levels = 0.0002743178815
Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs = 9701.860974
MLMG: Initial residual (resid0) = 9701.860974
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003233594044, 3.332962668e-08
MLMG: Timers: Solve = 0.40473032 Iter = 0.391608142 Bottom = 0.000841747
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1641628699
Call to estdt for level 1 gives dt_lev = 0.1158500464
Minimum estdt over all levels = 0.1158500464
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464
Multiplying dt by init_shrink; dt = 0.1158500464
Ignoring this new dt since it's larger than the previous dt = 0.0002743178815
Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.172635139
Doing initial pressure iteration #1
Timestep 0 starts with TIME = 0 DT = 0.0002743178815
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1769558.576
MLMG: Initial residual (resid0) = 1769558.576
MLMG: Final Iter. 7 resid, resid/bnorm = 0.001463159277, 8.268498689e-10
MLMG: Timers: Solve = 0.079364909 Iter = 0.067717423 Bottom = 0.016168481
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1769557.101
MLMG: Initial residual (resid0) = 12562.98066
MLMG: Final Iter. 4 resid, resid/bnorm = 0.0003393786037, 1.917873142e-10
MLMG: Timers: Solve = 0.046417517 Iter = 0.039716273 Bottom = 0.008005544
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.293088754e+10
MLMG: Initial residual (resid0) = 1.293088754e+10
MLMG: Final Iter. 9 resid, resid/bnorm = 0.05369472504, 4.152439255e-12
MLMG: Timers: Solve = 0.723302852 Iter = 0.705415336 Bottom = 0.001594617
Done calling nodal solver
Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815
Timing summary:
Advection :0.389240242 seconds
MAC Proj :0.182590695 seconds
Nodal Proj :0.772004954 seconds
Reactions :0.04390316 seconds
Misc :0.029695174 seconds
Base State :0.026349818 seconds
Time to advance time step: 1.417883918
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.169564162
Writing checkpoint 0 after all initialization
Writing checkpoint reacting_bubble_2d_chk0000000
Calling Evolve()
Timestep 1 starts with TIME = 0 DT = 0.0002743178815
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 484084.2374
MLMG: Initial residual (resid0) = 484084.2374
MLMG: Final Iter. 7 resid, resid/bnorm = 3.840933095e-05, 7.934431239e-11
MLMG: Timers: Solve = 0.075832408 Iter = 0.068735493 Bottom = 0.016855042
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 484084.2268
MLMG: Initial residual (resid0) = 15.7407696
MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002643406768, 5.460633959e-10
MLMG: Timers: Solve = 0.039387668 Iter = 0.032894248 Bottom = 0.007109279
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 3547174.999
MLMG: Initial residual (resid0) = 3547174.999
MLMG: Final Iter. 9 resid, resid/bnorm = 1.471722499e-05, 4.148998849e-12
MLMG: Timers: Solve = 0.722154738 Iter = 0.706825497 Bottom = 0.00160477
Done calling nodal solver
Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815
Timing summary:
Advection :0.395447072 seconds
MAC Proj :0.168281551 seconds
Nodal Proj :0.770873484 seconds
Reactions :0.042904366 seconds
Misc :0.029171445 seconds
Base State :0.026326071 seconds
Time to advance time step: 1.407018165
Call to estdt for level 0 gives dt_lev = 0.2285161774
Call to estdt for level 1 gives dt_lev = 0.1613599181
Minimum estdt over all levels = 0.1613599181
Call to estdt at beginning of step 2 gives dt =0.1613599181
dt_growth factor limits the new dt = 0.0003017496696
Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 709087.2082
MLMG: Initial residual (resid0) = 709087.2082
MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005366312414, 7.567915979e-10
MLMG: Timers: Solve = 0.065647464 Iter = 0.05918032 Bottom = 0.014917789
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 709086.6225
MLMG: Initial residual (resid0) = 129230.7288
MLMG: Final Iter. 5 resid, resid/bnorm = 9.585548412e-05, 1.351816281e-10
MLMG: Timers: Solve = 0.05424867 Iter = 0.048317644 Bottom = 0.010563826
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 3903892.246
MLMG: Initial residual (resid0) = 3903892.246
MLMG: Final Iter. 9 resid, resid/bnorm = 1.622713171e-05, 4.156654612e-12
MLMG: Timers: Solve = 0.72274577 Iter = 0.706940917 Bottom = 0.001585349
Done calling nodal solver
Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696
Timing summary:
Advection :0.392754955 seconds
MAC Proj :0.172149958 seconds
Nodal Proj :0.780060896 seconds
Reactions :0.04517809 seconds
Misc :0.031589114 seconds
Base State :0.024796978 seconds
Time to advance time step: 1.422130027
Time to regrid: 0.022701911
Call to estdt for level 0 gives dt_lev = 0.2285277611
Call to estdt for level 1 gives dt_lev = 0.161379943
Minimum estdt over all levels = 0.161379943
Call to estdt at beginning of step 3 gives dt =0.161379943
dt_growth factor limits the new dt = 0.0003319246366
Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1070293.273
MLMG: Initial residual (resid0) = 1070293.273
MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005794004919, 5.413474108e-10
MLMG: Timers: Solve = 0.065200958 Iter = 0.058720489 Bottom = 0.01448189
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1070292.628
MLMG: Initial residual (resid0) = 47909.95956
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0001436925759, 1.342554103e-10
MLMG: Timers: Solve = 0.055028993 Iter = 0.048293132 Bottom = 0.009757401
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 4294280.635
MLMG: Initial residual (resid0) = 4294280.635
MLMG: Final Iter. 9 resid, resid/bnorm = 1.787394285e-05, 4.162267065e-12
MLMG: Timers: Solve = 0.736638755 Iter = 0.721323193 Bottom = 0.001620531
Done calling nodal solver
Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366
Timing summary:
Advection :0.407231256 seconds
MAC Proj :0.173164622 seconds
Nodal Proj :0.79835797 seconds
Reactions :0.044450535 seconds
Misc :0.04565096 seconds
Base State :0.02683118 seconds
Time to advance time step: 1.469247696
Writing plotfile 3
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.170292567
Writing checkpoint 3
Writing checkpoint reacting_bubble_2d_chk0000003
Total Time: 10.24725504
Unused ParmParse Variables:
[TOP]::maestro.v(nvals = 1) :: [1]
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
Total GPU global memory (MB): 12066
Free GPU global memory (MB): 10868
[The Arena] space allocated (MB): 9049
[The Arena] space used (MB): 0
[The Device Arena] space allocated (MB): 8
[The Device Arena] space used (MB): 0
[The Managed Arena] space allocated (MB): 8
[The Managed Arena] space used (MB): 0
[The Pinned Arena] space allocated (MB): 8
[The Pinned Arena] space used (MB): 0
AMReX (21.02-37-g327c62b150bb) finalized