Initializing CUDA...
CUDA initialized with 1 GPU
AMReX (21.04-19-g58c3ba169a2b) initialized
Calling Setup()
Calling ReadParameters()
WARNING: burning_cutoff_density_lo not supplied in the inputs file
WARNING: setting burning_cutoff_density_lo = base_cutoff_density
reading extern runtime parameters ...
Calling VariableSetup()
Initializing Helmholtz EOS and using Coulomb corrections.
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-3d_pltInitData after InitData
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.555852714
inner sponge: r_sp , r_tp : 186468750, 224718750
Doing initial projection
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.071792811 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.505729024
Call to firstdt for level 0 gives dt_lev = 0.0004741795139
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139
Minimum firstdt over all levels = 0.0004741795139
Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs = 2054.815795
MLMG: Initial residual (resid0) = 2054.815795
MLMG: Final Iter. 7 resid, resid/bnorm = 3.934133019e-10, 1.91459158e-13
MLMG: Timers: Solve = 4.215457513 Iter = 4.147740744 Bottom = 0.022768349
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1719927642
Minimum estdt over all levels = 0.1719927642
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642
Multiplying dt by init_shrink; dt = 0.1719927642
Ignoring this new dt since it's larger than the previous dt = 0.0004741795139
Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.470906931
Doing initial pressure iteration #1
Timestep 0 starts with TIME = 0 DT = 0.0004741795139
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 2728631.974
MLMG: Initial residual (resid0) = 2728631.974
MLMG: Final Iter. 9 resid, resid/bnorm = 1.686136238e-05, 6.179419777e-12
MLMG: Timers: Solve = 0.219070358 Iter = 0.214922064 Bottom = 0.163520826
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 2728627.802
MLMG: Initial residual (resid0) = 8728.675636
MLMG: Final Iter. 5 resid, resid/bnorm = 0.00021640661, 7.930968445e-11
MLMG: Timers: Solve = 0.128736701 Iter = 0.12656731 Bottom = 0.098234788
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.15755262e+10
MLMG: Initial residual (resid0) = 1.15755262e+10
MLMG: Final Iter. 7 resid, resid/bnorm = 0.00912352741, 7.881738812e-13
MLMG: Timers: Solve = 4.191302565 Iter = 4.120655601 Bottom = 0.02171408
Done calling nodal solver
Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection :0.744410565 seconds
MAC Proj :0.365061309 seconds
Nodal Proj :4.314936964 seconds
Reactions :0.11678436 seconds
Misc :0.043290216 seconds
Base State :0.013738065 seconds
Time to advance time step: 5.584750063
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.466429179
Calling Evolve()
Timestep 1 starts with TIME = 0 DT = 0.0004741795139
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1308380.202
MLMG: Initial residual (resid0) = 1308380.202
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001214518852, 9.282614109e-11
MLMG: Timers: Solve = 0.197811667 Iter = 0.195562359 Bottom = 0.150371549
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1308380.239
MLMG: Initial residual (resid0) = 7.635485837
MLMG: Final Iter. 5 resid, resid/bnorm = 1.211453395e-05, 9.259184437e-12
MLMG: Timers: Solve = 0.13343701 Iter = 0.131239937 Bottom = 0.102888601
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 5488883.997
MLMG: Initial residual (resid0) = 5488883.997
MLMG: Final Iter. 7 resid, resid/bnorm = 5.022829882e-06, 9.150912799e-13
MLMG: Timers: Solve = 4.186115208 Iter = 4.118556446 Bottom = 0.021712812
Done calling nodal solver
Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection :0.698727891 seconds
MAC Proj :0.342507637 seconds
Nodal Proj :4.307159497 seconds
Reactions :0.116081545 seconds
Misc :0.019492363 seconds
Base State :0.012536228 seconds
Time to advance time step: 5.484209085
Call to estdt for level 0 gives dt_lev = 0.2012294727
Minimum estdt over all levels = 0.2012294727
Call to estdt at beginning of step 2 gives dt =0.2012294727
dt_growth factor limits the new dt = 0.0005215974653
Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1426181.41
MLMG: Initial residual (resid0) = 1426181.41
MLMG: Final Iter. 9 resid, resid/bnorm = 3.371932796e-05, 2.364308476e-11
MLMG: Timers: Solve = 0.226433786 Iter = 0.224194848 Bottom = 0.173337388
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1426291.688
MLMG: Initial residual (resid0) = 36463.4457
MLMG: Final Iter. 9 resid, resid/bnorm = 1.808932169e-05, 1.268276457e-11
MLMG: Timers: Solve = 0.217163713 Iter = 0.21495276 Bottom = 0.164024977
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6063485.842
MLMG: Initial residual (resid0) = 6063485.842
MLMG: Final Iter. 8 resid, resid/bnorm = 4.605796637e-05, 7.595955127e-12
MLMG: Timers: Solve = 4.772340196 Iter = 4.704854542 Bottom = 0.024613942
Done calling nodal solver
Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653
Timing summary:
Advection :0.700030929 seconds
MAC Proj :0.454896983 seconds
Nodal Proj :4.893742048 seconds
Reactions :0.115218821 seconds
Misc :0.020070278 seconds
Base State :0.011077053 seconds
Time to advance time step: 6.184148677
Call to estdt for level 0 gives dt_lev = 0.201266633
Minimum estdt over all levels = 0.201266633
Call to estdt at beginning of step 3 gives dt =0.201266633
dt_growth factor limits the new dt = 0.0005737572118
Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1597824.953
MLMG: Initial residual (resid0) = 1597824.953
MLMG: Final Iter. 9 resid, resid/bnorm = 4.090518104e-05, 2.560053964e-11
MLMG: Timers: Solve = 0.227426111 Iter = 0.225192731 Bottom = 0.174340929
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1597946.234
MLMG: Initial residual (resid0) = 56931.55492
MLMG: Final Iter. 9 resid, resid/bnorm = 2.89149231e-05, 1.809505382e-11
MLMG: Timers: Solve = 0.195428851 Iter = 0.193232356 Bottom = 0.14242231
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6669975.866
MLMG: Initial residual (resid0) = 6669975.866
MLMG: Final Iter. 8 resid, resid/bnorm = 2.822210764e-05, 4.231215855e-12
MLMG: Timers: Solve = 4.775681823 Iter = 4.708156371 Bottom = 0.025046154
Done calling nodal solver
Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118
Timing summary:
Advection :0.701350616 seconds
MAC Proj :0.434142193 seconds
Nodal Proj :4.897991376 seconds
Reactions :0.11494891 seconds
Misc :0.020808503 seconds
Base State :0.0144918 seconds
Time to advance time step: 6.169460541
Writing plotfile 3
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.467784981
Total Time: 33.43210319
Unused ParmParse Variables:
[TOP]::maestro.v(nvals = 1) :: [1]
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
Total GPU global memory (MB): 12066
Free GPU global memory (MB): 8694
[The Arena] space allocated (MB): 9049
[The Arena] space used (MB): 0
[The Device Arena] space allocated (MB): 8
[The Device Arena] space used (MB): 0
[The Managed Arena] space allocated (MB): 8
[The Managed Arena] space used (MB): 0
[The Pinned Arena] space allocated (MB): 8
[The Pinned Arena] space used (MB): 0
AMReX (21.04-19-g58c3ba169a2b) finalized