Initializing CUDA...
CUDA initialized with 1 GPU
AMReX (21.09-44-g26fb18b44481) initialized
Calling Setup()
Calling ReadParameters()
WARNING: burning_cutoff_density_lo not supplied in the inputs file
WARNING: setting burning_cutoff_density_lo = base_cutoff_density
reading extern runtime parameters ...
Calling VariableSetup()
Initializing Helmholtz EOS and using Coulomb corrections.
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
model file mapping, level: 1
dr of MAESTRO base state = 281250.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 729
radius at r_cutoff 205171875
Maximum HSE Error = 0.500936
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.169993063
inner sponge: r_sp , r_tp : 186468750, 224718750
Doing initial projection
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.025017638 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.162577647
Call to firstdt for level 0 gives dt_lev = 0.0004741795922
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922
Call to firstdt for level 1 gives dt_lev = 0.0002743178815
Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815
Minimum firstdt over all levels = 0.0002743178815
Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs = 9701.860974
MLMG: Initial residual (resid0) = 9701.860974
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003233594651, 3.332963295e-08
MLMG: Timers: Solve = 0.437660956 Iter = 0.41354899 Bottom = 0.001389256
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1641628699
Call to estdt for level 1 gives dt_lev = 0.1158500464
Minimum estdt over all levels = 0.1158500464
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464
Multiplying dt by init_shrink; dt = 0.1158500464
Ignoring this new dt since it's larger than the previous dt = 0.0002743178815
Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.152805426
Doing initial pressure iteration #1
Timestep 0 starts with TIME = 0 DT = 0.0002743178815
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1769558.576
MLMG: Initial residual (resid0) = 1769558.576
MLMG: Final Iter. 7 resid, resid/bnorm = 0.00146261308, 8.265412064e-10
MLMG: Timers: Solve = 0.069797218 Iter = 0.064600148 Bottom = 0.018153392
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1769557.101
MLMG: Initial residual (resid0) = 12562.98067
MLMG: Final Iter. 4 resid, resid/bnorm = 0.0003393807156, 1.917885077e-10
MLMG: Timers: Solve = 0.038985632 Iter = 0.035096777 Bottom = 0.008863258
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.293088754e+10
MLMG: Initial residual (resid0) = 1.293088754e+10
MLMG: Final Iter. 9 resid, resid/bnorm = 0.05373668671, 4.155684327e-12
MLMG: Timers: Solve = 0.759729108 Iter = 0.735770018 Bottom = 0.00193026
Done calling nodal solver
Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815
Timing summary:
Advection :0.375816697 seconds
MAC Proj :0.137028214 seconds
Nodal Proj :0.825223386 seconds
Reactions :0.050497736 seconds
Misc :0.028151906 seconds
Base State :0.024520053 seconds
Time to advance time step: 1.417179569
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.143776668
Writing checkpoint 0 after all initialization
Writing checkpoint reacting_bubble_2d_chk0000000
Calling Evolve()
Timestep 1 starts with TIME = 0 DT = 0.0002743178815
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 484084.2374
MLMG: Initial residual (resid0) = 484084.2374
MLMG: Final Iter. 7 resid, resid/bnorm = 3.840924467e-05, 7.934413416e-11
MLMG: Timers: Solve = 0.066877952 Iter = 0.063287891 Bottom = 0.017762387
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 484084.2267
MLMG: Initial residual (resid0) = 15.74076961
MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002646081643, 5.466159599e-10
MLMG: Timers: Solve = 0.032091594 Iter = 0.028052447 Bottom = 0.007421166
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 3547174.999
MLMG: Initial residual (resid0) = 3547174.999
MLMG: Final Iter. 9 resid, resid/bnorm = 1.47097744e-05, 4.146898422e-12
MLMG: Timers: Solve = 0.759161688 Iter = 0.73545289 Bottom = 0.001685759
Done calling nodal solver
Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815
Timing summary:
Advection :0.406346826 seconds
MAC Proj :0.12693716 seconds
Nodal Proj :0.826342434 seconds
Reactions :0.049016479 seconds
Misc :0.030973295 seconds
Base State :0.029315619 seconds
Time to advance time step: 1.44011757
Call to estdt for level 0 gives dt_lev = 0.2285161774
Call to estdt for level 1 gives dt_lev = 0.1613599181
Minimum estdt over all levels = 0.1613599181
Call to estdt at beginning of step 2 gives dt =0.1613599181
dt_growth factor limits the new dt = 0.0003017496696
Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 709087.2082
MLMG: Initial residual (resid0) = 709087.2082
MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005366308791, 7.56791087e-10
MLMG: Timers: Solve = 0.058097612 Iter = 0.054368217 Bottom = 0.015623752
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 709086.6225
MLMG: Initial residual (resid0) = 129230.7288
MLMG: Final Iter. 5 resid, resid/bnorm = 9.585576447e-05, 1.351820235e-10
MLMG: Timers: Solve = 0.047689972 Iter = 0.043788991 Bottom = 0.011234894
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 3903892.246
MLMG: Initial residual (resid0) = 3903892.246
MLMG: Final Iter. 9 resid, resid/bnorm = 1.6230857e-05, 4.157608862e-12
MLMG: Timers: Solve = 0.760663405 Iter = 0.737626861 Bottom = 0.001682509
Done calling nodal solver
Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696
Timing summary:
Advection :0.389395107 seconds
MAC Proj :0.133406152 seconds
Nodal Proj :0.827033938 seconds
Reactions :0.049694606 seconds
Misc :0.030874211 seconds
Base State :0.023049086 seconds
Time to advance time step: 1.430940561
Time to regrid: 0.020474863
Call to estdt for level 0 gives dt_lev = 0.2285277611
Call to estdt for level 1 gives dt_lev = 0.161379943
Minimum estdt over all levels = 0.161379943
Call to estdt at beginning of step 3 gives dt =0.161379943
dt_growth factor limits the new dt = 0.0003319246366
Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1070293.273
MLMG: Initial residual (resid0) = 1070293.273
MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005794013223, 5.413481867e-10
MLMG: Timers: Solve = 0.058233238 Iter = 0.054488718 Bottom = 0.015708836
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1070292.628
MLMG: Initial residual (resid0) = 47909.95956
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0001436929685, 1.342557771e-10
MLMG: Timers: Solve = 0.046784717 Iter = 0.042905487 Bottom = 0.010438891
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 4294280.635
MLMG: Initial residual (resid0) = 4294280.635
MLMG: Final Iter. 9 resid, resid/bnorm = 1.78553164e-05, 4.157929563e-12
MLMG: Timers: Solve = 0.76799232 Iter = 0.744410065 Bottom = 0.001806137
Done calling nodal solver
Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366
Timing summary:
Advection :0.408571547 seconds
MAC Proj :0.132217105 seconds
Nodal Proj :0.834082601 seconds
Reactions :0.049067771 seconds
Misc :0.030808088 seconds
Base State :0.032066634 seconds
Time to advance time step: 1.45526957
Writing plotfile 3
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.145691554
Writing checkpoint 3
Writing checkpoint reacting_bubble_2d_chk0000003
Total Time: 10.6412315
Unused ParmParse Variables:
[TOP]::maestro.v(nvals = 1) :: [1]
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
Total GPU global memory (MB): 12066
Free GPU global memory (MB): 10983
[The Arena] space allocated (MB): 9049
[The Arena] space used (MB): 0
[The Pinned Arena] space allocated (MB): 8
[The Pinned Arena] space used (MB): 0
AMReX (21.09-44-g26fb18b44481) finalized