Loading /raid/testing/microphysics-gfortran/amrex//Tools/GNUMake/comps/gnu.mak... Loading /raid/testing/microphysics-gfortran/amrex//Tools/GNUMake/sites/Make.unknown... ../../networks/update_headers.py \ --microphysics_path ../.. \ --net ignition_reaclib/C-burn-simple \ --odir tmp_build_dir/microphysics_sources/3d.gnu.TEST.OMP.EXE Depending ../../interfaces/eos_data.cpp ... Depending ../../screening/screen_data.cpp ... /raid/testing/microphysics-gfortran/amrex//Tools/F_scripts/write_probin.py \ -t ../../interfaces/extern_probin.template -o tmp_build_dir/microphysics_sources/3d.gnu.TEST.OMP.EXE/extern.F90 -n extern \ --cxx_prefix tmp_build_dir/microphysics_sources/3d.gnu.TEST.OMP.EXE/extern \ --pa "_parameters ../../EOS/helmholtz/_parameters ../../networks/ignition_reaclib/C-burn-simple/_parameters ../../networks/_parameters ../../integration/VODE/_parameters ../../integration/BS/_parameters ../../integration/_parameters ../../networks/_parameters" write_network.py: working on network file ../../networks/ignition_reaclib/C-burn-simple/pynucastro.net... writing tmp_build_dir/microphysics_sources/3d.gnu.TEST.OMP.EXE/network_properties.F90 writing tmp_build_dir/microphysics_sources/3d.gnu.TEST.OMP.EXE/network_properties.H NSCREEN Depending ../../EOS/helmholtz/actual_eos_data.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_Machine.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_MemPool.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_BLBackTrace.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_BLProfiler.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_PlotFileDataImpl.cpp ... write_probin.py: creating tmp_build_dir/microphysics_sources/3d.gnu.TEST.OMP.EXE/extern.F90 write_probin.py: working on parameter file _parameters... write_probin.py: working on parameter file ../../EOS/helmholtz/_parameters... write_probin.py: working on parameter file ../../networks/ignition_reaclib/C-burn-simple/_parameters... write_probin.py: working on parameter file ../../networks/_parameters... write_probin.py: working on parameter file ../../integration/VODE/_parameters... write_probin.py: working on parameter file ../../integration/BS/_parameters... write_probin.py: working on parameter file ../../integration/_parameters... write_probin.py: working on parameter file ../../networks/_parameters... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_PlotFileUtil.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_FilCC_C.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_BCUtil.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_PhysBCFunct.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_BCRec.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_MultiFabUtil_Perilla.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_MultiFabUtil.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_Geometry.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_CoordSys.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_MFIter.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_FabArrayBase.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_iMultiFab.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_MFCopyDescriptor.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_MultiFab.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_BaseFab.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_IArrayBox.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_FArrayBox.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_BoxDomain.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_BoxArray.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_BoxList.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_RealVect.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_RealBox.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_Periodicity.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_Orientation.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_IndexType.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_IntVect.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_BoxIterator.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_Box.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_VectorIO.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_IntConv.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_FPC.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_FabConv.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_GpuElixir.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_GpuAsyncArray.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_GpuUtility.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_GpuDevice.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_GpuControl.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_GpuLaunch.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_parstream.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_NFiles.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_EArena.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_DArena.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_CArena.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_BArena.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_Arena.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_VisMF.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_ParallelContext.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_ForkJoin.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_ParallelDescriptor.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_DistributionMapping.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_Random.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_Utility.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_parmparse_fi.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_ParmParse.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_BlockMutex.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_error_fi.cpp ... Depending /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX.cpp ... Depending main.cpp ... Depending tmp_build_dir/microphysics_sources/3d.gnu.TEST.OMP.EXE/extern_parameters.cpp ... Building f90/F90 dependency File ... /raid/testing/microphysics-gfortran/amrex//Tools/F_scripts/dep.py --prefix tmp_build_dir/o/3d.gnu.TEST.OMP.EXE \ --temp_dir tmp_build_dir/f/3d.gnu.TEST.OMP.EXE \ --cpp "cpp -E -traditional-cpp -P" \ --defines "-DBL_LANG_FORT -DAMREX_LANG_FORT -DAMREX_TESTING -DBL_USE_OMP -DAMREX_USE_OMP -DAMREX_GIT_VERSION=\"20.04-63-g426364fff439\" -DBL_GCC_VERSION=9.2.1 -DBL_GCC_MAJOR_VERSION=9 -DBL_GCC_MINOR_VERSION=2 -DAMREX_LAUNCH="" -DAMREX_DEVICE="" -DAMREX_CUDA_FORT_GLOBAL="" -DAMREX_CUDA_FORT_DEVICE="" -DAMREX_CUDA_FORT_HOST="" -DAMREX_CUDA_FORT_HOST_DEVICE="" -DBL_SPACEDIM=3 -DAMREX_SPACEDIM=3 -DBL_FORT_USE_UNDERSCORE -DAMREX_FORT_USE_UNDERSCORE -DBL_Linux -DAMREX_Linux -DCRSEGRNDOMP -DREACTIONS -DINTEGRATOR=0 -DVODE -DBS -I. -I/raid/testing/microphysics-gfortran/amrex//Src/Base -I../../util -I../../integration/VODE -I../../integration/VODE/cuVODE/source/ -I../../integration/BS -I../../integration/utils -I../../integration -I../../screening -I../../neutrinos -I. -I../../EOS -I../../EOS/helmholtz -I../../networks/ignition_reaclib/C-burn-simple -I../../EOS -I../../networks -I../../interfaces -I../../constants -Itmp_build_dir/microphysics_sources/3d.gnu.TEST.OMP.EXE -I/raid/testing/microphysics-gfortran/amrex//Tools/C_scripts" \ --f90_preprocess "cat " unit_test.f90 util.f90 /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_constants_mod.f90 ../../networks/ignition_reaclib/C-burn-simple/physical_constants.f90 ../../networks/rate_type.f90 ../../integration/integration_data.f90 ../../integration/utils/nonaka_plot.f90 ../../constants/constants_cgs.f90 variables.F90 react_zones.F90 /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_FILCC_3D.F90 /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_BLutil_F.F90 /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_BLProfiler_F.F90 /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_filcc_mod.F90 /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_omp_mod.F90 /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_acc_mod.F90 /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_fort_mod.F90 /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_error_mod.F90 /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_parmparse_mod.F90 /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_string_mod.F90 /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_bc_types_mod.F90 /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_io_mod.F90 /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_ParallelDescriptor_F.F90 /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_mempool_mod.F90 ../../EOS/composition.F90 ../../EOS/helmholtz/actual_eos.F90 ../../networks/ignition_reaclib/C-burn-simple/actual_network.F90 ../../networks/ignition_reaclib/C-burn-simple/reaclib_rates.F90 ../../networks/ignition_reaclib/C-burn-simple/table_rates.F90 tmp_build_dir/microphysics_sources/3d.gnu.TEST.OMP.EXE/network_properties.F90 ../../networks/ignition_reaclib/C-burn-simple/actual_burner.F90 ../../networks/ignition_reaclib/C-burn-simple/actual_rhs.F90 ../../util/microphysics_math.F90 ../../util/esum_module.F90 ../../integration/VODE/vode_integrator.F90 ../../integration/VODE/vode_rhs.F90 ../../integration/VODE/vode_type.F90 ../../integration/VODE/cuvode_parameters.F90 ../../integration/VODE/vode_rpar.F90 ../../integration/VODE/cuVODE/source/cuvode.F90 ../../integration/VODE/cuVODE/source/cuvode_type.F90 ../../integration/VODE/cuVODE/source/cuvode_dvhin.F90 ../../integration/VODE/cuVODE/source/cuvode_dvjac.F90 ../../integration/VODE/cuVODE/source/cuvode_dvjust.F90 ../../integration/VODE/cuVODE/source/cuvode_dvnlsd.F90 ../../integration/VODE/cuVODE/source/cuvode_dvset.F90 ../../integration/VODE/cuVODE/source/cuvode_dvstep.F90 ../../integration/VODE/cuVODE/source/linpack_module.F90 ../../integration/BS/bs_integrator.F90 ../../integration/BS/bs_type.F90 ../../integration/BS/bs_rhs.F90 ../../integration/BS/bs_jac.F90 ../../integration/BS/stiff_ode.F90 ../../integration/BS/bs_rpar.F90 ../../integration/integrator.F90 ../../integration/integrator_scaling.F90 ../../integration/utils/numerical_jacobian.F90 ../../integration/utils/network_rhs.F90 ../../integration/utils/jacobian_sparsity.F90 ../../integration/utils/temperature_integration.F90 ../../screening/screen.F90 ../../neutrinos/sneut5.F90 ../../interfaces/microphysics.F90 ../../interfaces/network.F90 ../../interfaces/eos.F90 ../../interfaces/eos_override.F90 ../../interfaces/eos_type.F90 ../../interfaces/burn_type.F90 ../../interfaces/burner.F90 tmp_build_dir/microphysics_sources/3d.gnu.TEST.OMP.EXE/extern.F90 > tmp_build_dir/d/3d.gnu.TEST.OMP.EXE/f90.depends Loading /raid/testing/microphysics-gfortran/amrex//Tools/GNUMake/comps/gnu.mak... Loading /raid/testing/microphysics-gfortran/amrex//Tools/GNUMake/sites/Make.unknown... /raid/testing/microphysics-gfortran/amrex//Tools/C_scripts/describe_sources.py \ --git_names "Castro AMReX Microphysics" \ --git_dirs "../.. /raid/testing/microphysics-gfortran/amrex/ ../.." Compiling main.cpp ... g++ -Werror=return-type -g -O3 -fopenmp -pthread -DAMREX_TESTING -DBL_USE_OMP -DAMREX_USE_OMP -DAMREX_GIT_VERSION=\"20.04-63-g426364fff439\" -DBL_GCC_VERSION=9.2.1 -DBL_GCC_MAJOR_VERSION=9 -DBL_GCC_MINOR_VERSION=2 -DAMREX_LAUNCH="" -DAMREX_DEVICE="" -DAMREX_CUDA_FORT_GLOBAL="" -DAMREX_CUDA_FORT_DEVICE="" -DAMREX_CUDA_FORT_HOST="" -DAMREX_CUDA_FORT_HOST_DEVICE="" -DBL_SPACEDIM=3 -DAMREX_SPACEDIM=3 -DBL_FORT_USE_UNDERSCORE -DAMREX_FORT_USE_UNDERSCORE -DBL_Linux -DAMREX_Linux -DCRSEGRNDOMP -DREACTIONS -DINTEGRATOR=0 -DVODE -DBS -I. -I/raid/testing/microphysics-gfortran/amrex//Src/Base -I../../util -I../../integration/VODE -I../../integration/VODE/cuVODE/source/ -I../../integration/BS -I../../integration/utils -I../../integration -I../../screening -I../../neutrinos -I. -I../../EOS -I../../EOS/helmholtz -I../../networks/ignition_reaclib/C-burn-simple -I../../EOS -I../../networks -I../../interfaces -I../../constants -Itmp_build_dir/microphysics_sources/3d.gnu.TEST.OMP.EXE -I/raid/testing/microphysics-gfortran/amrex//Tools/C_scripts -c main.cpp -o tmp_build_dir/o/3d.gnu.TEST.OMP.EXE/main.o Compiling AMReX.cpp ... g++ -Werror=return-type -g -O3 -fopenmp -pthread -DAMREX_TESTING -DBL_USE_OMP -DAMREX_USE_OMP -DAMREX_GIT_VERSION=\"20.04-63-g426364fff439\" -DBL_GCC_VERSION=9.2.1 -DBL_GCC_MAJOR_VERSION=9 -DBL_GCC_MINOR_VERSION=2 -DAMREX_LAUNCH="" -DAMREX_DEVICE="" -DAMREX_CUDA_FORT_GLOBAL="" -DAMREX_CUDA_FORT_DEVICE="" -DAMREX_CUDA_FORT_HOST="" -DAMREX_CUDA_FORT_HOST_DEVICE="" -DBL_SPACEDIM=3 -DAMREX_SPACEDIM=3 -DBL_FORT_USE_UNDERSCORE -DAMREX_FORT_USE_UNDERSCORE -DBL_Linux -DAMREX_Linux -DCRSEGRNDOMP -DREACTIONS -DINTEGRATOR=0 -DVODE -DBS -I. -I/raid/testing/microphysics-gfortran/amrex//Src/Base -I../../util -I../../integration/VODE -I../../integration/VODE/cuVODE/source/ -I../../integration/BS -I../../integration/utils -I../../integration -I../../screening -I../../neutrinos -I. -I../../EOS -I../../EOS/helmholtz -I../../networks/ignition_reaclib/C-burn-simple -I../../EOS -I../../networks -I../../interfaces -I../../constants -Itmp_build_dir/microphysics_sources/3d.gnu.TEST.OMP.EXE -I/raid/testing/microphysics-gfortran/amrex//Tools/C_scripts -c /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX.cpp -o tmp_build_dir/o/3d.gnu.TEST.OMP.EXE/AMReX.o Compiling AMReX_error_fi.cpp ... source git hashes: Castro : 20.04-10-g2c513455 AMReX : 20.04-63-g426364fff4 Microphysics : 20.04-10-g2c513455 g++ -Werror=return-type -g -O3 -fopenmp -pthread -DAMREX_TESTING -DBL_USE_OMP -DAMREX_USE_OMP -DAMREX_GIT_VERSION=\"20.04-63-g426364fff439\" -DBL_GCC_VERSION=9.2.1 -DBL_GCC_MAJOR_VERSION=9 -DBL_GCC_MINOR_VERSION=2 -DAMREX_LAUNCH="" -DAMREX_DEVICE="" -DAMREX_CUDA_FORT_GLOBAL="" -DAMREX_CUDA_FORT_DEVICE="" -DAMREX_CUDA_FORT_HOST="" -DAMREX_CUDA_FORT_HOST_DEVICE="" -DBL_SPACEDIM=3 -DAMREX_SPACEDIM=3 -DBL_FORT_USE_UNDERSCORE -DAMREX_FORT_USE_UNDERSCORE -DBL_Linux -DAMREX_Linux -DCRSEGRNDOMP -DREACTIONS -DINTEGRATOR=0 -DVODE -DBS -I. -I/raid/testing/microphysics-gfortran/amrex//Src/Base -I../../util -I../../integration/VODE -I../../integration/VODE/cuVODE/source/ -I../../integration/BS -I../../integration/utils -I../../integration -I../../screening -I../../neutrinos -I. -I../../EOS -I../../EOS/helmholtz -I../../networks/ignition_reaclib/C-burn-simple -I../../EOS -I../../networks -I../../interfaces -I../../constants -Itmp_build_dir/microphysics_sources/3d.gnu.TEST.OMP.EXE -I/raid/testing/microphysics-gfortran/amrex//Tools/C_scripts -c /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_error_fi.cpp -o tmp_build_dir/o/3d.gnu.TEST.OMP.EXE/AMReX_error_fi.o Compiling AMReX_BlockMutex.cpp ... g++ -Werror=return-type -g -O3 -fopenmp -pthread -DAMREX_TESTING -DBL_USE_OMP -DAMREX_USE_OMP -DAMREX_GIT_VERSION=\"20.04-63-g426364fff439\" -DBL_GCC_VERSION=9.2.1 -DBL_GCC_MAJOR_VERSION=9 -DBL_GCC_MINOR_VERSION=2 -DAMREX_LAUNCH="" -DAMREX_DEVICE="" -DAMREX_CUDA_FORT_GLOBAL="" -DAMREX_CUDA_FORT_DEVICE="" -DAMREX_CUDA_FORT_HOST="" -DAMREX_CUDA_FORT_HOST_DEVICE="" -DBL_SPACEDIM=3 -DAMREX_SPACEDIM=3 -DBL_FORT_USE_UNDERSCORE -DAMREX_FORT_USE_UNDERSCORE -DBL_Linux -DAMREX_Linux -DCRSEGRNDOMP -DREACTIONS -DINTEGRATOR=0 -DVODE -DBS -I. -I/raid/testing/microphysics-gfortran/amrex//Src/Base -I../../util -I../../integration/VODE -I../../integration/VODE/cuVODE/source/ -I../../integration/BS -I../../integration/utils -I../../integration -I../../screening -I../../neutrinos -I. -I../../EOS -I../../EOS/helmholtz -I../../networks/ignition_reaclib/C-burn-simple -I../../EOS -I../../networks -I../../interfaces -I../../constants -Itmp_build_dir/microphysics_sources/3d.gnu.TEST.OMP.EXE -I/raid/testing/microphysics-gfortran/amrex//Tools/C_scripts -c /raid/testing/microphysics-gfortran/amrex//Src/Base/AMReX_BlockMutex.cpp -o tmp_build_dir/o/3d.gnu.TEST.OMP.EXE/AMReX_BlockMutex.o In file included from ../../integration/VODE/vode_dvhin.H:4, from ../../integration/VODE/vode_dvode.H:5, from ../../integration/VODE/vode_integrator.H:14, from ../../integration/integrator.H:4, from ../../interfaces/burner.H:5, from react_zones.H:9, from main.cpp:15: ../../integration/VODE/vode_rhs.H:5:10: fatal error: actual_network.H: No such file or directory 5 | #include | ^~~~~~~~~~~~~~~~~~ compilation terminated. gmake: *** [/raid/testing/microphysics-gfortran/amrex//Tools/GNUMake/Make.rules:183: tmp_build_dir/o/3d.gnu.TEST.OMP.EXE/main.o] Error 1 gmake: *** Waiting for unfinished jobs....