Loading /home/testing/microphysics-pgi/amrex//Tools/GNUMake/comps/pgi.mak... Loading /home/testing/microphysics-pgi/amrex//Tools/GNUMake/sites/Make.unknown... /home/testing/microphysics-pgi/amrex//Tools/F_scripts/write_probin.py \ -t ../../unit_test/extern_probin.template -o extern.F90 -n extern \ --pa "_parameters ../../EOS/helmholtz/_parameters ../../networks/_parameters ../../networks/_parameters ../../integration/VBDF/_parameters ../../integration/_parameters ../../integration/VBDF/_parameters ../../integration/_parameters ../../networks/_parameters" Depending ../../util/BLAS/dgemm.f ... Depending ../../util/BLAS/idamax.f ... Depending ../../util/BLAS/dscal.f ... Depending ../../util/BLAS/dcopy.f ... write_probin.py: creating extern.F90 write_probin.py: working on parameter file _parameters... write_probin.py: working on parameter file ../../EOS/helmholtz/_parameters... write_probin.py: working on parameter file ../../networks/_parameters... write_probin.py: working on parameter file ../../networks/_parameters... write_probin.py: working on parameter file ../../integration/VBDF/_parameters... write_probin.py: working on parameter file ../../integration/_parameters... write_probin.py: working on parameter file ../../integration/VBDF/_parameters... write_probin.py: working on parameter file ../../integration/_parameters... write_probin.py: working on parameter file ../../networks/_parameters... Depending ../../util/BLAS/ddot.f ... Depending ../../util/BLAS/daxpy.f ... Depending ../../util/LINPACK/vddot.f ... Depending ../../util/LINPACK/dgbfa.f ... Depending ../../util/LINPACK/dgbsl.f ... Depending ../../util/LINPACK/dgesl.f ... Depending ../../util/LINPACK/dgefa.f ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_MemPool.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_BLBackTrace.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_BLProfiler.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_PlotFileUtil.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_BCUtil.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_PhysBCFunct.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_BCRec.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_MultiFabUtil_Perilla.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_MultiFabUtil.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_COORDSYS_3D.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_Geometry.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_CoordSys.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_MFIter.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_FabArrayBase.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_iMultiFab.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_MFCopyDescriptor.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_MultiFab.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_BaseFab.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_IArrayBox.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_FArrayBox.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_BoxDomain.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_BoxArray.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_BoxList.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_RealVect.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_RealBox.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_Periodicity.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_Orientation.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_IndexType.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_IntVect.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_BoxIterator.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_Box.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_VectorIO.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_IntConv.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_FPC.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_FabConv.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_CudaFabImpl.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_CudaFab.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_CudaAllocators.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_CudaUtility.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_CudaLaunch.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_CudaDevice.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_GpuControl.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_parstream.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_NFiles.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_CArena.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_BArena.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_Arena.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_VisMF.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_ParallelContext.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_ForkJoin.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_ParallelDescriptor.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_DistributionMapping.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_Utility.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_parmparse_fi.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_ParmParse.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_error_fi.cpp ... Depending /home/testing/microphysics-pgi/amrex//Src/Base/AMReX.cpp ... Depending main.cpp ... Building f90/F90 dependency File ... /home/testing/microphysics-pgi/amrex//Tools/F_scripts/dep.py --prefix tmp_build_dir/o/3d.pgi.ACC.EXE \ --temp_dir tmp_build_dir/f/3d.pgi.ACC.EXE \ --cpp "cpp -E -traditional-cpp -P" \ --defines "-DBL_LANG_FORT -DAMREX_LANG_FORT -DNDEBUG -DAMREX_GIT_VERSION=\"18.11-156-ga2e25aeaa066\" -DAMREX_USE_ACC -DAMREX_LAUNCH="" -DAMREX_DEVICE="" -DAMREX_CUDA_FORT_GLOBAL="" -DAMREX_CUDA_FORT_DEVICE="" -DAMREX_CUDA_FORT_HOST="" -DAMREX_USE_GPU -DBL_COALESCE_FABS -DBL_SPACEDIM=3 -DAMREX_SPACEDIM=3 -DBL_FORT_USE_UNDERSCORE -DAMREX_FORT_USE_UNDERSCORE -DBL_Linux -DAMREX_Linux -DCRSEGRNDOMP -DACC -DREACTIONS -DINTEGRATOR=2 -DINTEGRATOR=2 -I. -I/home/testing/microphysics-pgi/amrex//Src/Base -I../../util -I../../util/LINPACK -I../../util/BLAS -I../../integration/VBDF -I../../integration -I../../util -I../../util/LINPACK -I../../util/BLAS -I../../integration/VBDF -I../../integration -I../../screening -I. -I../../unit_test -I../../interfaces -I../../EOS -I../../EOS/helmholtz -I../../conductivity -I../../conductivity/stellar -I../../networks -I../../networks/ignition_simple -I../../EOS -I../../networks -I/home/testing/microphysics-pgi/amrex//Tools/C_scripts" \ --f90_preprocess "cat " unit_test.f90 util.f90 ../../unit_test/constants_cgs.f90 /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_MultiFabUtil_3d.f90 /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_constants_mod.f90 ../../networks/rate_type.f90 ../../integration/VBDF/bdf_rhs.f90 ../../integration/VBDF/bdf.f90 ../../integration/VBDF/bdf_type.f90 ../../integration/integration_data.f90 variables.F90 react_zones.F90 ../../unit_test/microphysics.F90 ../../unit_test/network.F90 ../../unit_test/eos.F90 ../../unit_test/eos_override.F90 ../../interfaces/eos_type.F90 ../../interfaces/burn_type.F90 /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_FILCC_3D.F90 /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_BLutil_F.F90 /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_BLBoxLib_F.F90 /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_BLProfiler_F.F90 /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_MultiFabUtil_nd.F90 /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_filcc_mod.F90 /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_omp_mod.F90 /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_fort_mod.F90 /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_error_mod.F90 /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_parmparse_mod.F90 /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_string_mod.F90 /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_bc_types_mod.F90 /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_io_mod.F90 /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_ParallelDescriptor_F.F90 /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_mempool_mod.F90 ../../EOS/helmholtz/actual_eos.F90 ../../conductivity/stellar/stellar_conductivity.F90 ../../util/microphysics_math.F90 ../../util/esum_module.F90 ../../integration/VBDF/vbdf_integrator.F90 ../../integration/integrator.F90 ../../integration/numerical_jacobian.F90 ../../integration/jacobian_sparsity.F90 ../../integration/integrator_scaling.F90 ../../integration/temperature_integration.F90 ../../integration/rpar.F90 ../../networks/ignition_simple/actual_network.F90 ../../networks/ignition_simple/actual_burner.F90 ../../networks/ignition_simple/actual_rhs.F90 ../../screening/screen.F90 extern.F90 > tmp_build_dir/d/3d.pgi.ACC.EXE/f90.depends Loading /home/testing/microphysics-pgi/amrex//Tools/GNUMake/comps/pgi.mak... Loading /home/testing/microphysics-pgi/amrex//Tools/GNUMake/sites/Make.unknown... /home/testing/microphysics-pgi/amrex//Tools/C_scripts/describe_sources.py \ --git_names "Castro AMReX Microphysics" \ --git_dirs "../.. /home/testing/microphysics-pgi/amrex/ ../.." Compiling main.cpp ... pgc++ -gopt -O2 -fast --c++11 -acc -ta=tesla:cc -Minfo=accel -mcmodel=medium -DNDEBUG -DAMREX_GIT_VERSION=\"18.11-156-ga2e25aeaa066\" -DAMREX_USE_ACC -DAMREX_LAUNCH="" -DAMREX_DEVICE="" -DAMREX_CUDA_FORT_GLOBAL="" -DAMREX_CUDA_FORT_DEVICE="" -DAMREX_CUDA_FORT_HOST="" -DAMREX_USE_GPU -DBL_COALESCE_FABS -DBL_SPACEDIM=3 -DAMREX_SPACEDIM=3 -DBL_FORT_USE_UNDERSCORE -DAMREX_FORT_USE_UNDERSCORE -DBL_Linux -DAMREX_Linux -DCRSEGRNDOMP -DACC -DREACTIONS -DINTEGRATOR=2 -DINTEGRATOR=2 -I. -I/home/testing/microphysics-pgi/amrex//Src/Base -I../../util -I../../util/LINPACK -I../../util/BLAS -I../../integration/VBDF -I../../integration -I../../util -I../../util/LINPACK -I../../util/BLAS -I../../integration/VBDF -I../../integration -I../../screening -I. -I../../unit_test -I../../interfaces -I../../EOS -I../../EOS/helmholtz -I../../conductivity -I../../conductivity/stellar -I../../networks -I../../networks/ignition_simple -I../../EOS -I../../networks -I/home/testing/microphysics-pgi/amrex//Tools/C_scripts -c main.cpp -o tmp_build_dir/o/3d.pgi.ACC.EXE/main.o Compiling AMReX.cpp ... pgc++ -gopt -O2 -fast --c++11 -acc -ta=tesla:cc -Minfo=accel -mcmodel=medium -DNDEBUG -DAMREX_GIT_VERSION=\"18.11-156-ga2e25aeaa066\" -DAMREX_USE_ACC -DAMREX_LAUNCH="" -DAMREX_DEVICE="" -DAMREX_CUDA_FORT_GLOBAL="" -DAMREX_CUDA_FORT_DEVICE="" -DAMREX_CUDA_FORT_HOST="" -DAMREX_USE_GPU -DBL_COALESCE_FABS -DBL_SPACEDIM=3 -DAMREX_SPACEDIM=3 -DBL_FORT_USE_UNDERSCORE -DAMREX_FORT_USE_UNDERSCORE -DBL_Linux -DAMREX_Linux -DCRSEGRNDOMP -DACC -DREACTIONS -DINTEGRATOR=2 -DINTEGRATOR=2 -I. -I/home/testing/microphysics-pgi/amrex//Src/Base -I../../util -I../../util/LINPACK -I../../util/BLAS -I../../integration/VBDF -I../../integration -I../../util -I../../util/LINPACK -I../../util/BLAS -I../../integration/VBDF -I../../integration -I../../screening -I. -I../../unit_test -I../../interfaces -I../../EOS -I../../EOS/helmholtz -I../../conductivity -I../../conductivity/stellar -I../../networks -I../../networks/ignition_simple -I../../EOS -I../../networks -I/home/testing/microphysics-pgi/amrex//Tools/C_scripts -c /home/testing/microphysics-pgi/amrex//Src/Base/AMReX.cpp -o tmp_build_dir/o/3d.pgi.ACC.EXE/AMReX.o Compiling AMReX_error_fi.cpp ... pgc++ -gopt -O2 -fast --c++11 -acc -ta=tesla:cc -Minfo=accel -mcmodel=medium -DNDEBUG -DAMREX_GIT_VERSION=\"18.11-156-ga2e25aeaa066\" -DAMREX_USE_ACC -DAMREX_LAUNCH="" -DAMREX_DEVICE="" -DAMREX_CUDA_FORT_GLOBAL="" -DAMREX_CUDA_FORT_DEVICE="" -DAMREX_CUDA_FORT_HOST="" -DAMREX_USE_GPU -DBL_COALESCE_FABS -DBL_SPACEDIM=3 -DAMREX_SPACEDIM=3 -DBL_FORT_USE_UNDERSCORE -DAMREX_FORT_USE_UNDERSCORE -DBL_Linux -DAMREX_Linux -DCRSEGRNDOMP -DACC -DREACTIONS -DINTEGRATOR=2 -DINTEGRATOR=2 -I. -I/home/testing/microphysics-pgi/amrex//Src/Base -I../../util -I../../util/LINPACK -I../../util/BLAS -I../../integration/VBDF -I../../integration -I../../util -I../../util/LINPACK -I../../util/BLAS -I../../integration/VBDF -I../../integration -I../../screening -I. -I../../unit_test -I../../interfaces -I../../EOS -I../../EOS/helmholtz -I../../conductivity -I../../conductivity/stellar -I../../networks -I../../networks/ignition_simple -I../../EOS -I../../networks -I/home/testing/microphysics-pgi/amrex//Tools/C_scripts -c /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_error_fi.cpp -o tmp_build_dir/o/3d.pgi.ACC.EXE/AMReX_error_fi.o source git hashes: Castro : 18.11 AMReX : 18.11-156-ga2e25aeaa Microphysics : 18.11 Compiling AMReX_ParmParse.cpp ... pgc++ -gopt -O2 -fast --c++11 -acc -ta=tesla:cc -Minfo=accel -mcmodel=medium -DNDEBUG -DAMREX_GIT_VERSION=\"18.11-156-ga2e25aeaa066\" -DAMREX_USE_ACC -DAMREX_LAUNCH="" -DAMREX_DEVICE="" -DAMREX_CUDA_FORT_GLOBAL="" -DAMREX_CUDA_FORT_DEVICE="" -DAMREX_CUDA_FORT_HOST="" -DAMREX_USE_GPU -DBL_COALESCE_FABS -DBL_SPACEDIM=3 -DAMREX_SPACEDIM=3 -DBL_FORT_USE_UNDERSCORE -DAMREX_FORT_USE_UNDERSCORE -DBL_Linux -DAMREX_Linux -DCRSEGRNDOMP -DACC -DREACTIONS -DINTEGRATOR=2 -DINTEGRATOR=2 -I. -I/home/testing/microphysics-pgi/amrex//Src/Base -I../../util -I../../util/LINPACK -I../../util/BLAS -I../../integration/VBDF -I../../integration -I../../util -I../../util/LINPACK -I../../util/BLAS -I../../integration/VBDF -I../../integration -I../../screening -I. -I../../unit_test -I../../interfaces -I../../EOS -I../../EOS/helmholtz -I../../conductivity -I../../conductivity/stellar -I../../networks -I../../networks/ignition_simple -I../../EOS -I../../networks -I/home/testing/microphysics-pgi/amrex//Tools/C_scripts -c /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_ParmParse.cpp -o tmp_build_dir/o/3d.pgi.ACC.EXE/AMReX_ParmParse.o Compiling AMReX_parmparse_fi.cpp ... pgc++ -gopt -O2 -fast --c++11 -acc -ta=tesla:cc -Minfo=accel -mcmodel=medium -DNDEBUG -DAMREX_GIT_VERSION=\"18.11-156-ga2e25aeaa066\" -DAMREX_USE_ACC -DAMREX_LAUNCH="" -DAMREX_DEVICE="" -DAMREX_CUDA_FORT_GLOBAL="" -DAMREX_CUDA_FORT_DEVICE="" -DAMREX_CUDA_FORT_HOST="" -DAMREX_USE_GPU -DBL_COALESCE_FABS -DBL_SPACEDIM=3 -DAMREX_SPACEDIM=3 -DBL_FORT_USE_UNDERSCORE -DAMREX_FORT_USE_UNDERSCORE -DBL_Linux -DAMREX_Linux -DCRSEGRNDOMP -DACC -DREACTIONS -DINTEGRATOR=2 -DINTEGRATOR=2 -I. -I/home/testing/microphysics-pgi/amrex//Src/Base -I../../util -I../../util/LINPACK -I../../util/BLAS -I../../integration/VBDF -I../../integration -I../../util -I../../util/LINPACK -I../../util/BLAS -I../../integration/VBDF -I../../integration -I../../screening -I. -I../../unit_test -I../../interfaces -I../../EOS -I../../EOS/helmholtz -I../../conductivity -I../../conductivity/stellar -I../../networks -I../../networks/ignition_simple -I../../EOS -I../../networks -I/home/testing/microphysics-pgi/amrex//Tools/C_scripts -c /home/testing/microphysics-pgi/amrex//Src/Base/AMReX_parmparse_fi.cpp -o tmp_build_dir/o/3d.pgi.ACC.EXE/AMReX_parmparse_fi.o "main.cpp", line 164: error: argument of type "int" is incompatible with parameter of type "const int *" do_react(AMREX_INT_ANYD(bx.loVect()), AMREX_INT_ANYD(bx.hiVect()), ^ "main.cpp", line 164: error: argument of type "int" is incompatible with parameter of type "const int *" do_react(AMREX_INT_ANYD(bx.loVect()), AMREX_INT_ANYD(bx.hiVect()), ^ "main.cpp", line 164: error: argument of type "int" is incompatible with parameter of type "amrex::Real *" do_react(AMREX_INT_ANYD(bx.loVect()), AMREX_INT_ANYD(bx.hiVect()), ^ "main.cpp", line 164: error: argument of type "int" is incompatible with parameter of type "const int *" do_react(AMREX_INT_ANYD(bx.loVect()), AMREX_INT_ANYD(bx.hiVect()), ^ "main.cpp", line 164: error: argument of type "int" is incompatible with parameter of type "const int *" do_react(AMREX_INT_ANYD(bx.loVect()), AMREX_INT_ANYD(bx.hiVect()), ^ "main.cpp", line 164: error: argument of type "int" is incompatible with parameter of type "int *" do_react(AMREX_INT_ANYD(bx.loVect()), AMREX_INT_ANYD(bx.hiVect()), ^ "main.cpp", line 165: error: argument of type "amrex::Real *" is incompatible with parameter of type "const int *" BL_TO_FORTRAN_ANYD(state[mfi]), ^ "main.cpp", line 165: error: too many arguments in function call BL_TO_FORTRAN_ANYD(state[mfi]), ^ "main.cpp", line 194: warning: variable "n" was declared but never referenced int n = 0; ^ 8 errors detected in the compilation of "main.cpp". gmake: *** [/home/testing/microphysics-pgi/amrex//Tools/GNUMake/Make.rules:138: tmp_build_dir/o/3d.pgi.ACC.EXE/main.o] Error 2 gmake: *** Waiting for unfinished jobs....